Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02022 ATGACTTGCTCCAATGTCACTATGTTGGTTTCCTCCAAACCTTCTTTATCTGATGCCTCTAACCTCTCCTTCCGTTCTGTCCTCAACCCTTTTCAGCTTCCTTCACAAAACTCATCAACTTGCACCCCTTCAAGATCCACTGTCACCCCAGTTCAGTGTGGTCTCAGAGAGCTCAGAACCCGTATTGATCCTGTGAAGAACGCTCAGAAAATAACCGAGGCAATGAAGCTTGTGGCTGCTGCAAGAGTCAGAAGAGCTCAAGAAGCTGTTGTTAATGGAAGGCCTTTCTCTGAGACCCTTGTTGAAGTGCTTTACAACATCAATGAACGACTCCAAACTGAAGATATTGATGCCCCAACTCTATCCATGTACACTCGGCTTCATTGA 387 0.4574 MTCSNVTMLVSSKPSLSDASNLSFRSVLNPFQLPSQNSSTCTPSRSTVTPVQCGLRELRTRIDPVKNAQKITEAMKLVAAARVRRAQEAVVNGRPFSETLVEVLYNINERLQTEDIDAPTLSMYTRLH* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02022 128 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 54 113 IPR035968 GO:0015986|GO:0045261|GO:0046933
Rops3g02022 128 Pfam ATP synthase 55 113 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops3g02022 128 Gene3D ATP synthase, gamma subunit, helix hairpin domain 56 124 - -
Rops3g02022 128 PANTHER ATP SYNTHASE GAMMA CHAIN 5 121 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops3g02022 128 FunFam ATP synthase gamma chain, chloroplastic 53 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02022 Rops-Chr3 36536267 36536653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02022 30 119 Primary Pumps ATPases AT1G15700 60.417 1.67e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02022 K02115 - gmx:100037480 199.904