Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02015 ATGAGTCCAAAGAAATGGTTTAAGTCGATTATCAACCTGAAGAAACCGAAGCGAGATAAATCGAGACAAGCAGAGGTTCAATCTGCTGTTGAAATATCAAATGAGTCCACCGAGGAGAAACAAGACACTCATGAAGAGTCAAGTAGCATTTCCAATGAAGGTTTGATGATAGAACCGACAGTTCCCACAAAGTTGATCGAAGATATTGCTGCTACTCGGATTCAAAATGCTTTTCGATCATTTCAGGCAAGAAGAGCATTGCACCATCTAAGGGGAGCAGAGAAATTTGAGGCTTTAATTCAAGATCACATGGCCAAAGATCAAACATTAACTGCACTAGATTACATACACTCGTGGGGCAGAATACAAGACCAAATTAGAGCTCGCAGACTCTGCATGATAACAGAAGCCAGGATTAAGCAAAAGAAATTCGAAAACCAATTGAAACTTGAGGCTAAGATTCATGAGCTTGAGGTGGAATGGTGTGGTGGTTCTGAAACAATGGAAGAGATACTTTCCAGGATACATCAGCGAGAAGCAGCAGCAGTCAAACGAGAGCGAGCTATGGCATATGCCTTCTCTCATCAGTGGAGGCCCAATTGTAGCCAGTATTTGGGCCAGGCTTCTTTCAGCCTTGGCAAAGAAAGCTGGGGTTGGAGCTGGAAGGAAAGGTGGGTTGCAGCCCGTCCTTGGGAAATCAGGGTTCGTGTTTTGGGCTCCACAACAAAGAAAATCAATGGCCAGAACCATAGAGCCAAGGTAGACATGAAAGACCAAAATGATAACAAAGTGCCATTGTCTGAGCCTGACTTGTCAAACGACAAGGAGATTGAGAAAGAGAAAGAAAACAGCATTCCAGAGTTGTCAAACAACAATCCAGACAAATAA 888 0.4324 MSPKKWFKSIINLKKPKRDKSRQAEVQSAVEISNESTEEKQDTHEESSSISNEGLMIEPTVPTKLIEDIAATRIQNAFRSFQARRALHHLRGAEKFEALIQDHMAKDQTLTALDYIHSWGRIQDQIRARRLCMITEARIKQKKFENQLKLEAKIHELEVEWCGGSETMEEILSRIHQREAAAVKRERAMAYAFSHQWRPNCSQYLGQASFSLGKESWGWSWKERWVAARPWEIRVRVLGSTTKKINGQNHRAKVDMKDQNDNKVPLSEPDLSNDKEIEKEKENSIPELSNNNPDK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02015 295 PANTHER IQ-DOMAIN 5-RELATED 4 263 - -
Rops3g02015 295 MobiDBLite consensus disorder prediction 16 54 - -
Rops3g02015 295 MobiDBLite consensus disorder prediction 248 285 - -
Rops3g02015 295 ProSiteProfiles IQ motif profile. 67 95 IPR000048 GO:0005515
Rops3g02015 295 MobiDBLite consensus disorder prediction 246 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02015 Rops-Chr3 36234428 36238616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02015 7 237 IQD Protein Family AT3G15050 57.576 1.65e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02015 - - gmx:100810603 442.195