Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01995 ATGGCTTCTTCCTCTCTCGATGATGTTACAGTGCCTCTCAAAAAGTATGAAGTATTCATCAGCTTTAGGGGCGAGGATACTCGTGCCAACTTCACCAGCCATCTTCATGCAGCTTTATGCAGAAGCTACATCGATACCTACATAGATTACAGGATCGAGAAAGGAGAGGGAACCGATGCGGTTGAAGCCATATTGTTAGATATGACTCGAATTACATGTATAAATCTAAGCTCCAAAGCATTCAAAAAGATGCCAAACGTAAGATTACTTGCTTTCCAAGCCAATCGGGACTTTAAGAGAATTAATTTTGTGAACTTGCCGAAGGGTCTTGAATTATTGCCTAAGAACTTAAGGTATTTTGGGTGGGATAGATATCCATTAAAGTCTCTACCATCAACTTTTTGTCCTGAGAAACTTGTTAAGCTTTCTCTACGATACAGCAATGTGGAAAAACTTTGGAGTGGTGTACAGAACTTGCCAAGTTTAGAGAGAATTGACCTTAAAGAGTCCGTAAACTTGGTAGAGTGTCCTAATTTGTCTGGAGCCCCAAATCTTAAACATGTAATTCTTGCAGGCTGTAAAAGTTTGTCTCATGTTGATCCATCTATTTACACTCTCCCGAAGCTTGTAGAATTAAATGTGAGTGTATGCGAGTCACTTCAGAGCCTTTGCAGTAGCACTTGTTCACCATCTTTTCGAAGATTTTATGCTTGGGGTTGCTTTAATCTCCAAGAGTTCACATTAATATCCCCCAGTACCAGTGACCCTTCCATAACTGAGTATTTAGCACTACTTTTTAGTGCTGTCATAAGCTTACCTGAAAGTATTAAGTATCTTCCTCGACTCAAATTTCTTGAAGTTGGTGAATGTAAAATGCTTCAATCTATACCTGCACTTCCACAATCCATTCAGTGCTTCTTTGTCTGGAACTGCAAATCTCTTCAAAATGTGTTAACTTCAACAAGTGAACCACCCAACAAACCCCACAACTTTATGTTACTGCTTCCTAATTGCATAAATTTAGATCAACATTCACACGATGCCATTTTGAAAGATGTCATTGTTAGGTTTGAACTTGGAGCAAAACTACTGTTAGCGGAAGTATTAGAAAACAAAGAAGATGCATCCTCGGATGATAATAATGATGATGATTATCATTACGATTTCGATTATCGTTTGTGCATTTATAAAGCAGTAAGTAGTGGTAAGATTTGCTACATGTTACCAGCTGGAAATTGCAAAGTTGGAGACTGGTTCCATTACCACTCTACACAAACTTTGGTTACGATTGAACTTCCCCTTAATCAATTGGGTTTCATTTTCTACTTGGTTCTTTCTCAAGTTCAATCATTTCACATGGGATACAGGGCAAGTTTTGGATGTGAATGCTACTTGGAAACTAATTGGGGTGAAAGGATCAATATCCAAAGTTTCTTTGCAAATGAAATCGTCATGCTTAATCCTTGTGGTTTATTTGACGTTAAGTCAGATCATATATTTTTATGGTATGATGCACAATGTTGCAAGCAGATAACAGAAACAATCAAAGAAATAAAAACCAATGACAGGTATACCACTCACAATCCAAAGATTACATTCAAATTCTTCGCTCGAAATCAAAATAATGAGGAAGCAGTGATAAAAAAGTGTGGATTTCGTTGGATATATGGCTCAGAAGATCAAGGTGTCGAGGAAGAAGAAGGATGTAAATCTGAGATATGTAGGGAAACTCATAGAATTGAGGGCTCTGAATCTAATGAGCAAGAAGAAACAGTTACTGTAACAGAGGAATTCATGCAAAATGTCTTTGGAAGTTCATCCAACCTTGAAGTACAAGAAACAAAAGAGTTGAGGCATTTACTTGAAGAACTATTGCATATTGGATTTGGTGGAGACCTCATGCAATGA 1908 0.3763 MASSSLDDVTVPLKKYEVFISFRGEDTRANFTSHLHAALCRSYIDTYIDYRIEKGEGTDAVEAILLDMTRITCINLSSKAFKKMPNVRLLAFQANRDFKRINFVNLPKGLELLPKNLRYFGWDRYPLKSLPSTFCPEKLVKLSLRYSNVEKLWSGVQNLPSLERIDLKESVNLVECPNLSGAPNLKHVILAGCKSLSHVDPSIYTLPKLVELNVSVCESLQSLCSSTCSPSFRRFYAWGCFNLQEFTLISPSTSDPSITEYLALLFSAVISLPESIKYLPRLKFLEVGECKMLQSIPALPQSIQCFFVWNCKSLQNVLTSTSEPPNKPHNFMLLLPNCINLDQHSHDAILKDVIVRFELGAKLLLAEVLENKEDASSDDNNDDDYHYDFDYRLCIYKAVSSGKICYMLPAGNCKVGDWFHYHSTQTLVTIELPLNQLGFIFYLVLSQVQSFHMGYRASFGCECYLETNWGERINIQSFFANEIVMLNPCGLFDVKSDHIFLWYDAQCCKQITETIKEIKTNDRYTTHNPKITFKFFARNQNNEEAVIKKCGFRWIYGSEDQGVEEEEGCKSEICRETHRIEGSESNEQEETVTVTEEFMQNVFGSSSNLEVQETKELRHLLEELLHIGFGGDLMQ* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01995 635 SUPERFAMILY L domain-like 63 342 - -
Rops3g01995 635 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 55 IPR035897 -
Rops3g01995 635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 56 IPR044974 GO:0006952
Rops3g01995 635 Gene3D - 13 82 IPR035897 -
Rops3g01995 635 Gene3D Ribonuclease Inhibitor 115 323 IPR032675 -
Rops3g01995 635 Pfam C-JID domain 415 559 IPR045344 -
Rops3g01995 635 Pfam TIR domain 15 57 IPR000157 GO:0007165
Rops3g01995 635 Pfam Leucine Rich Repeat 138 157 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01995 Rops-Chr3 35840940 35844646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01995 19 306 WRKY Transcription Factor Family AT4G12020 32.166 1.69e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01995 - - mtr:25502326 575.089