Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01992 | ATGGTGACAACATCAGGGAACCATTTTATCCTCGATGACCATTTGATCCTTGATGGAGCTGGCAGCAGAGGTGACCCTAGGTTTCCTCATCCTCCTATTTCCAGCCCACTGCATCATGGTTTTCGTCATCAGATCCTGCCAATGCAATTCCATCATCCTCGGTTACCTGCTCATGGTTTTGCTGTGGGTTACAGAGGCTCAGCACTTCCACCATTATACCGACACATGCTGGAGACAACTCTTAGAAATCAAAATTTTGGTCCCATGGGTTTTATCAATGTTGATGATGTCACTTTACTGGTTGGCCATCGCAACGATATGCGTAACGACATTGAGGATATGTCTTATGAGGAACTTCTTGCATTGGGTGAGAGGATTGGCAATGTAACTACGGGTTTGTCAGAGGAAATGATTGTAAGTCAAATGCTGACAAAGGCAGCTTCTGTGGAACAGGAAACTGATGCATGTGTAATATGTCAGGAAGAATATAAGAAAGGAGAGAAGATTGGAATTCTTCAATGCAGACATGAATATCATGCAGATTGTTTAAGGAAATGGTTACTTGAGAAAAATGCCTGTCCCATGTGCAAATCTGAAGCATTGATTCTTGGAGGAAACAGTGTATAA | 627 | 0.4258 | MVTTSGNHFILDDHLILDGAGSRGDPRFPHPPISSPLHHGFRHQILPMQFHHPRLPAHGFAVGYRGSALPPLYRHMLETTLRNQNFGPMGFINVDDVTLLVGHRNDMRNDIEDMSYEELLALGERIGNVTTGLSEEMIVSQMLTKAASVEQETDACVICQEEYKKGEKIGILQCRHEYHADCLRKWLLEKNACPMCKSEALILGGNSV* | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01992 | 208 | SUPERFAMILY | RING/U-box | 155 | 201 | - | - | |
Rops3g01992 | 208 | SMART | ring_2 | 156 | 196 | IPR001841 | - | |
Rops3g01992 | 208 | Pfam | Ring finger domain | 155 | 197 | IPR001841 | - | |
Rops3g01992 | 208 | CDD | RING-H2_RNF24-like | 154 | 200 | - | - | |
Rops3g01992 | 208 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 34 | 201 | IPR045191 | GO:0061630 | |
Rops3g01992 | 208 | ProSiteProfiles | Zinc finger RING-type profile. | 156 | 197 | IPR001841 | - | |
Rops3g01992 | 208 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 201 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01992 | Rops-Chr3 | 35780665 | 35781621 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01992 | 103 | 201 | C3H Transcription Factor Family | AT2G15530 | 54.206 | 2.50e-33 | 124 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01992 | K19041 | - | gmx:100779069 | 223.787 |