Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01989 | ATGCGTGAATCGGGTTCGTCATTGGAGAACACGAAGGTTGGTCGATCGGGTTTGCGGCTTCGGAAGAAACACAAGAGATTGGATGCAATATGTGAAGAAGAGTACAATCGAAACCATGGTGAAATCAATGATGGTGGTGGTAATGGTGATGGTGATGGTGATGGTGATGGAGGGGTTCGGCGTAGCTCTCGAGTTCGGCGTGCCCCGGTTCTTCTCGATGCCTCTCCCACTCCCTCGAAGAAACGGCGGAGGCTGAGCAAGAGTGGTGTGAAGGATGCCAAAAGTGTGGAACGGGGTTCTGGGGGTTCTGGTGGCGCCGAGGTTTCGAGAATGTGGAGTTCGAGATTGAGATCGAGGGATGGAAGTGTAGGTTTTAGGGTGAATGAGGAGGAGGAGGAGAGGGAATTGCCACGTATGAAAAGGAAGCTTTTTGAGGATGATGTTGGAAGCAGGGGTGCTGATGAGGTGGAGGTTAAGGAGGTTGATAAGAAAGAGGAATTGGAAGGTGTGATGCCGAAAATAGTTAAGTCGAAGAGACCTGGGAGGATCAAAGCCACGAAGCGCGAAGAGGGACATAAAGATAAGGAGAAAGAGGCTCGGGTGAATTTAGATGAGATCAATAGTCAAGAAGTGGAGGTTGCATTGAACAAAGATGAGGAGAGTGCTTCAGTTCACGAGGAAACACAGTTGTCTGGTGGGAATCAGATAGAAACATTGGATGGGAATGCCACTATAGAGAATCAAGAGAGAGAACTATCTAACAATGTGCAAATGGAGGAGTGTGATGACAGCACTGAACTGTCACCAGTGGAACTTGTAGATAAACATGTTGATGATCATTTAGAGACAGCAAAGGAAGGAAAAAATGCAAGCAATGTTGCAGAAGTTGCTGGAATTTTGACAGGAATTAGAGAAAATGAAGTATCTGCTGATAAGGAGGTTGACATTGATGAAAAAACCTTACAAGATGAAAATATTGTGAGGATGAATGAGTCCAAGGAAGCATCAAATGATAAGCCTCGCCACCAACGTATTAAAGAGGGTAGGCGGTGTGGTTTGTGTGGTGGAGGTATTGACTGTAAACTTCCAAAAAGATTAGTTCACGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCTTCAGCTTCGGAGGAGCCTAATTATGATATCTGGGATGGCTTTGGTGATGAACGTGGATGGTTGGGGCGCCTCTTGGGTCCTATTAATGATCGCCATGGTATTGCTCGAATATGGGTTCATCAGAACTGTGCTGTATGGAGTCCAGAGGTTTACTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCCCTGTGTAGAGGAAGAGCATTGAAGTGCACACGATGCGGGAGGCGAGGAGCTACCATTGGTTGTCGAGTTGATCGTTGTCCAAAAACATATCACTTGCCTTGTGCAAGGGCAAATGGCTGCATCTTTGATCATCGTAAATTTCTTATAGCCTGCACCGATCATCGGCATCTCTTCCAACCTCACGGTAACAAATATTTAGACCGGATAAAAAAGTTAAAGGCTAGGAAAATGAAGTTGGAGATAAGGAAGCTTTCAAATGATGCTTGCAGAAAGGACATTGAAGCAGAAGAGAGATGGTTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGTGGTTCAGACTCTTCCAGTGAAAAATCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGGTGTATGAAGGAAGTTGTTATTTTACCTCTACTATATCCTGAGTTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTGTTGCATGGATATCCTGGAACTGGGAAAACCCTAGTGGTCCGGGCATTAATAGGTGCATGTGCTTCTAGTGATAAACGGATTGCTTATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTGGGTGATGCTGAGCGACAACTAAGACTATTGTTTCAGGTTGCCGAGAGATGCCAACCTTCTATAATATTTTTTGATGAGATAGATGGACTGGCACCTGTCCGAACTAGGCAGCAAGATCAGACGCATAGTTCTGTTGTGTCAACATTACTTGCTCTTTTAGATGGTTTAAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGTCCTGATGCTGTTGACCCGGCACTTAGGCGCCCTGGAAGATTTGATCGGGAAATTTATTTTCCATTGCCATCAATTAAGGACAGAGCTGCTATTCTATCACTTCACACACGGAGGTGGCCAAAACCAATTGCCGGATCCTTGCTTGAGTGGATTGCAAGAAAAACTCCTGGTTTTGCTGGTGCTGATCTCCAGGCTCTCTGTACTCAAGCGGCAATCAATGCTTTGAAGAGGAATTTCCCTTTGCAAGAAGTGCTATCTGCAGCTCAAGAGAAAGATTCTAGTTGTAAGAACATTCCTCTTCCATCCTTTGCGGTGGAGGAGAAGGATTGGTTGGAGGCTTTATCGTGTTCCCCACCACCATGCTCCCGGAGAGAAGCTGGAAATGCTGCTAGTGATGTAATATGCGCCCCTCTTCCCATCCACCTTATTTCGTGTTTGTTGCGGCCATTATGCACTCTTCTCATATCTCTTTTTCTTGATGAATGCCTATGGTTGCCACCTCCTATATCTAGAGCTGTAACAATAATTAAGAATGTGATGATTTCTGCTTTGGACAAAAAGAAAATGCTGATTGATCATTGGTGGTTGCATGTTGATAAGTTCCTTCAAGAAGCAAATATTGCTGCTGAGCTTGAGAGGAAGCTCACTTGTTCTGGCATTTTGTCTGCTGAAGATGGTTTTGCTGGTTCGCTTGGTGGTGTGGATGATACTGATGATAACAGGGTGAAATTTGAACCCTCTATAAAGCACAATGTTGGCATGTGCAGTGGTTTGTCATTTGCATTGCCTAGCAAATCAGGATTTCGAATATTGATTGCTGGAAATCCCAGATCTGGCCAGAGACATCTTGCATCTTGCCTTCTTTACTGCTTTATTGGGAATATTGAAATTCAGAAGGTTGATATGGCAACTATTTCTCAAGAAGGACATGGAGATGTAGTACAAGGGATTGCACAAATATTAATGAAATGTGCTAGCGTGCAATCATGTGTAGTATTCATGCCAAGAATAGATTTGTGGGCTGTAGAGACACATTACCAAATTTCTAAAAACACCAATTCCAGCTCAACAAATAATCTATCTCCTAATATGGAAAAGTCTTGTTTCAAACCAAGCCAAGTTGCTGAGAAGGCAAACACATTGAATTCAGAGAAAAACAAGTCAGCAGAAATGGCCAATGGCCAAGCCAGCAGAAGGGCTTCACATGCCTGGATGTCATTCATTGAGCAGGTGGAATCCATTGGTGTATCCACATCATTGATGATTCTGGCTACCTCAGAAGTTCCTTATACTGAACTTCCCTGTAAAATAAGGGAATTCTTCAAGACTTATCAGTCAAAATACAACCAAACAACTCCTTTGGAACTGACAGTTCCTCAATTCTCTCTGCATATTGATGGGAAATTTGATCAGGAGGTGGTGATCAATCAATCTGCAGTAGAGCTATTGAGAAATTTAGTTGAGCAGCAGATTCAATTGATTCATCAGAGATCTCGTATTCATATGAGTGCTCGAAGGGGATACAGTACCTCTGATTCTATTGAAGCTTGTAAAGATAGAGTAATTCAGAGAAACAATAATGGATCAGCCAATGAGAAGAAAGGTGAAATGCAACTTTCCGAATCCTCTACAATAGTTCCAGCACCACCCAGTAGTAGGTCACTGAAGGGAAAGTCAACCCTGTTGTTGGCAATATCCTCATTTGGGTATCAAATTCTTCGATACCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGATGGTCCTTGTGCCGATGTAAGTGGACCTTGGAAGGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAGTAATTCACAAGACAAGGTCACGGTTTCTTGTACCTCTAGTGGCACGAAAAGCAAAGAAAGATCTGGTGTAGTCAGAGGCTTGGTTGCTGTTGGTTTATCCGCTTACAGAGGTGCTTACACTTCTGTTAGGGAAGTTTCCCTTGAGGTACGGAATGCTCTTGAGATCTTGGTTGGGCAAGTCAATACCAAAATTCAAGCTGGGAAAGACAAATATCAATATCTTCGCATTTTATCGCAAGTGGCTTACCTGGAAGATATGGTTAATAACTGGGCCTATTCATTGCTGAGTCTAGAGCAGGATTCCCCAGAGCTTGGGACAAAAGTTGTGCCAGAAGGTGTTAGGTCATTGAACAGCCATCCTGCATGTGAGGATCACCAAGCTGAAGGTGCCGATTGCCATTTGGTTGTTCCTATGGACAATGATGGTTTGGAGGTGCACGAGAGAAGTTGTAAGGGAATTCCTGCTGAAACAACTGGATGTCAAACCTTGATTGACAGAAATGATGATTTAAATAATCTTCATCATGATGATAGCAATGCAAATTCTAAAGGATCTCTTCAAAACCATTCCTTTTCAGATAAGCATGTTGACAACTCTTCTACTGTAAACCCACCTGTTGATCCATCCATAAATCAGGAAAATGGGACACCAACCGTAAAATTTGCAGAGGTGAGTGGAGAATTTGGGTCTGCGATAGACTTGAATGAATCTGTACTCACTTCCTCTGTTTCCCTTTCTAAAAATGGAGAATGTGGGTTGTCAAAAGATTTGAATAAACCTACATCTACTCACCCTGCTACCCTTTTTGAAAATGGACTTCATAGTGCCTCTGAACCAGAGGGTGTTAAAATTGGTAACTCCAAGACAGTTTCTAATCTGTCCCTCAACTCATCATCAGTTGACACTGGTGTTAATTTTATTGATGATAACTCTGGTAAAGATGAGAATGCTATAGACATTAACATCCCTTCAAGCGAAGGCAGTGATCCTGCTGAATCTGGGGTTATTTGTTTATATCGATGTTGCCCTCAATGTCTATACAGTCTCTATAATTTGACAAGGAAATTACTTGTTAATGAATGTGGGTTGAACAATAGCCAATTGACAGTGGAGGATGTCCATGATGCTGTGGCATCACTATCTGTGGATCTTATTTCAGCTGTTAGAAAATTCAATCTGGCCAAAGATTTCACTGATAAAAAGCATGGGGCATCTTCAAACCTGAGAACTTGTGATCCAAGAAACCCAGGAGAGGCAGCTGAATGTGTTTCTCACTCAACAAGCCTTCATACAGATGCAAACAAAGATATGGCACTGAATGAATCACTGAAGCTTGATTTTAAATTTATTTTCAGAGATGGTGTACTTATTCATATGGACCCAGATAAGGATGTCTCTTTTCATTGTAAATTTGAGACCTTTTGCCTTTGTTCTGTTAGAGAGTTGATAGTAATGACAAAGCGCCCTTTTGATTGA | 5532 | 0.4261 | MRESGSSLENTKVGRSGLRLRKKHKRLDAICEEEYNRNHGEINDGGGNGDGDGDGDGGVRRSSRVRRAPVLLDASPTPSKKRRRLSKSGVKDAKSVERGSGGSGGAEVSRMWSSRLRSRDGSVGFRVNEEEEERELPRMKRKLFEDDVGSRGADEVEVKEVDKKEELEGVMPKIVKSKRPGRIKATKREEGHKDKEKEARVNLDEINSQEVEVALNKDEESASVHEETQLSGGNQIETLDGNATIENQERELSNNVQMEECDDSTELSPVELVDKHVDDHLETAKEGKNASNVAEVAGILTGIRENEVSADKEVDIDEKTLQDENIVRMNESKEASNDKPRHQRIKEGRRCGLCGGGIDCKLPKRLVHDNGESENEAYSGSSASEEPNYDIWDGFGDERGWLGRLLGPINDRHGIARIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPHGNKYLDRIKKLKARKMKLEIRKLSNDACRKDIEAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSSSEKSFQGWESVAGLKDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACASSDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPVRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIKDRAAILSLHTRRWPKPIAGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSAAQEKDSSCKNIPLPSFAVEEKDWLEALSCSPPPCSRREAGNAASDVICAPLPIHLISCLLRPLCTLLISLFLDECLWLPPPISRAVTIIKNVMISALDKKKMLIDHWWLHVDKFLQEANIAAELERKLTCSGILSAEDGFAGSLGGVDDTDDNRVKFEPSIKHNVGMCSGLSFALPSKSGFRILIAGNPRSGQRHLASCLLYCFIGNIEIQKVDMATISQEGHGDVVQGIAQILMKCASVQSCVVFMPRIDLWAVETHYQISKNTNSSSTNNLSPNMEKSCFKPSQVAEKANTLNSEKNKSAEMANGQASRRASHAWMSFIEQVESIGVSTSLMILATSEVPYTELPCKIREFFKTYQSKYNQTTPLELTVPQFSLHIDGKFDQEVVINQSAVELLRNLVEQQIQLIHQRSRIHMSARRGYSTSDSIEACKDRVIQRNNNGSANEKKGEMQLSESSTIVPAPPSSRSLKGKSTLLLAISSFGYQILRYPHFAELCWVTSKLKDGPCADVSGPWKGWPFNSCIIRPSNSQDKVTVSCTSSGTKSKERSGVVRGLVAVGLSAYRGAYTSVREVSLEVRNALEILVGQVNTKIQAGKDKYQYLRILSQVAYLEDMVNNWAYSLLSLEQDSPELGTKVVPEGVRSLNSHPACEDHQAEGADCHLVVPMDNDGLEVHERSCKGIPAETTGCQTLIDRNDDLNNLHHDDSNANSKGSLQNHSFSDKHVDNSSTVNPPVDPSINQENGTPTVKFAEVSGEFGSAIDLNESVLTSSVSLSKNGECGLSKDLNKPTSTHPATLFENGLHSASEPEGVKIGNSKTVSNLSLNSSSVDTGVNFIDDNSGKDENAIDINIPSSEGSDPAESGVICLYRCCPQCLYSLYNLTRKLLVNECGLNNSQLTVEDVHDAVASLSVDLISAVRKFNLAKDFTDKKHGASSNLRTCDPRNPGEAAECVSHSTSLHTDANKDMALNESLKLDFKFIFRDGVLIHMDPDKDVSFHCKFETFCLCSVRELIVMTKRPFD* | 1844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01989 | 1843 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 399 | 502 | IPR013083 | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 1 | 113 | - | - | |
Rops3g01989 | 1843 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 588 | 854 | IPR027417 | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 1264 | 1291 | - | - | |
Rops3g01989 | 1843 | FunFam | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 346 | 502 | - | - | |
Rops3g01989 | 1843 | PANTHER | AAA DOMAIN-CONTAINING | 15 | 1752 | IPR045199 | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 183 | 198 | - | - | |
Rops3g01989 | 1843 | Gene3D | - | 587 | 863 | IPR027417 | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 25 | 40 | - | - | |
Rops3g01989 | 1843 | Pfam | AAA+ lid domain | 787 | 819 | IPR041569 | - | |
Rops3g01989 | 1843 | ProSitePatterns | AAA-protein family signature. | 731 | 749 | IPR003960 | GO:0005524|GO:0016887 | |
Rops3g01989 | 1843 | FunFam | ATPase family, AAA domain-containing 2 | 585 | 768 | - | - | |
Rops3g01989 | 1843 | Pfam | PHD-like zinc-binding domain | 421 | 500 | - | - | |
Rops3g01989 | 1843 | Pfam | ATPase family associated with various cellular activities (AAA) | 626 | 761 | IPR003959 | GO:0005524|GO:0016887 | |
Rops3g01989 | 1843 | Gene3D | - | 762 | 854 | - | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 1529 | 1568 | - | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Rops3g01989 | 1843 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 390 | 500 | IPR034732 | - | |
Rops3g01989 | 1843 | MobiDBLite | consensus disorder prediction | 1523 | 1568 | - | - | |
Rops3g01989 | 1843 | SMART | AAA_5 | 622 | 763 | IPR003593 | GO:0016887 | |
Rops3g01989 | 1843 | FunFam | p-loop containing nucleoside triphosphate hydrolase superfamily protein | 762 | 854 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01989 | Rops-Chr3 | 35708764 | 35718787 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01989 | 618 | 846 | Calmodulin-binding Proteins | AT3G56690 | 38.428 | 2.08e-42 | 168 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01989 | - | - | lja:Lj3g3v0428950.2 | 2659.4 |