Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01957 ATGGAGCAGTCTCTGCTGAGAGGAGAAAGCAGGGGCCAGAGGTACCGCTCGCGAGGGATTTTCCGTCGCACCAACGCACTGGCCTTCGGCTGTAACTACGAGAAAGCCGCAGCACTCATCGATCTAGCTAAAGATGGTGTTGGTATACCTGAGCAGATTCTTGTTGATCCATCAAACTTACAAAGTTACGCAAGATTTTATATCATATTCACTAAATGCAATTTCATCTGGTCTCTCAGTTATTTTGCTTTGATAGCCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAGGAATACCGCACATTCTTGCAAAGATAGAGAGTATTTCTTTTTGGGACAGTTGCCGTATCTAACTGCTGCGGAATGTCTTATTTATGAGGGAATAGCTCTTATTTTGCTAATCGTTCATACTTTCTTCCCATTATCATACGAAGGATACGATATAAATGGAAAAAATGCCATTAATATATTGAAGGCCTTCTGTCTATTGGTTCTCATTGTTGATATGCTGGTTTATGCTCTTTATATGTTTCCAATGGCTTTTGATATACTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTCTGAGTATCAGGTGTGGTGAAACATATACACCAGATAATGTATGCAAGAATGAGCAATTTCAAGTCATGCAGGGAGCTACGGGAAACTATCATCATCTTGGCTGGAATGCTTAA 711 0.4037 MEQSLLRGESRGQRYRSRGIFRRTNALAFGCNYEKAAALIDLAKDGVGIPEQILVDPSNLQSYARFYIIFTKCNFIWSLSYFALIALNFLEKPLWCERNTAHSCKDREYFFLGQLPYLTAAECLIYEGIALILLIVHTFFPLSYEGYDINGKNAINILKAFCLLVLIVDMLVYALYMFPMAFDILPFRIAPYIRVVLFILSIRCGETYTPDNVCKNEQFQVMQGATGNYHHLGWNA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01957 236 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 203 IPR044581 GO:0005245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01957 Rops-Chr3 34962942 34984953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01957 1 203 Ion Channels AT4G03560 55.172 1.06e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01957 K16900 - gmx:100806160 306.605