Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01955 ATGTCAAGTGGAGCAACGCACAGGTGTCATGCTTGCAATCAACCAATCGTGCTTGAAGGGAGAGATGCCATGCAACCATATTACCATTCTGACTGTATTGTTCCTTGGTTGACACGGATTGAAGGAGCAGAAATCAACAAGAGCCCCTTAGCTTCGAAGGAATACATTCGTGCTTTAGGCAATGACCAAAACCATATCCCATTTCGGAGAAGCAAACTCGCAGAAGAGCTTCGTGACTCCTTGGTAGGCAACTCAAAGACGGTTATGATATCTTCTAGTCTCGTGGGTCTCCAAGCTCACATGCATGAAACCATTTCGTCGCCATGCAACTCACATAACTCACCCTCCTTTTCTGGTTATGGGCCCCCGTTTTGCATGAAGACTGCTAATGTTACTGGCAAAGCGACCAGCCTTATAAATGGCCAAGATGAGGAGTTGACTCACCCATCAATTCTGACCTCACAAACCAACACACGTTCGTGCCCTGGAGCATCACTGTTCACGTAG 507 0.4714 MSSGATHRCHACNQPIVLEGRDAMQPYYHSDCIVPWLTRIEGAEINKSPLASKEYIRALGNDQNHIPFRRSKLAEELRDSLVGNSKTVMISSSLVGLQAHMHETISSPCNSHNSPSFSGYGPPFCMKTANVTGKATSLINGQDEELTHPSILTSQTNTRSCPGASLFT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01955 168 ProSiteProfiles Kinesin motor domain profile. 1 117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01955 168 MobiDBLite consensus disorder prediction 146 168 - -
Rops3g01955 168 Pfam Kinesin motor domain 40 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01955 168 PANTHER KINESIN-RELATED PROTEIN 6 38 92 IPR027640 GO:0003777|GO:0007018
Rops3g01955 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 91 IPR027417 -
Rops3g01955 168 Gene3D Kinesin motor domain 37 107 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01955 Rops-Chr3 34893916 34894641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01955 41 107 Calmodulin-binding Proteins AT5G65930 38.806 4.35e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01955 K10393 - bvg:104884771 86.6557