Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01950 ATGGAGGCATTTTCCAGTGCTTCAATCTTGGTTTTGACAGTGATAGTTGCTGTGATTCCCATATGGGCATGGCAGATACTGAACTCGTTATGGCTGAGGCCAAAGAGGTTGGAAAAGCTTCTCAGAGCTCAAGGTTTTCAAGGTGATCCATACAAGCTTTCATTTGATAATCCGAAGCAAAAGTACATACTGAAGATGCAATATGAAGCTAAATCCAAAACCATTGGTCTCTCCCATGATGTTGCACCACAAATCTTCTCGCCTGTTCACCAAACTGTCAACAAATATGGCAAGAATTCCTTTTTATGGGAAGATAGAACACCGAAGGTGATCATCATGGACCCAGAACAAATCAAGGAAGTCTTTAACAGGATGCAGAACTTCCCAAAACCAAAGTTAAATTCCATTATCAAGATTCTGAGCGTTGGTCTGATAGATTATGAGGGTGAGAAATGGGCAAAACATCGGAAGATTATCAACCCAGCATTCCACTTAGATAAATTGAAAAATATGCTACCAGCGTTTTTGAAAAGTGGCCATGATATGATTAGCAAATGGAAGGAAATGTTGTCATCGGATGGAACATGTGAGATTGATGTTTGGCCTTTCCTTCAGAATTTGACTTGTGATATAATTTCTAGAACAGCATTTGGAAGCAGCTATGCAGAAGGAACAAAAATATTTGAACTTCTGAAAAGGCAGGGGTATCTTTTAATGACAGGAGGATATATGAACATCATTCCAATGTGGTGGCTTCTACCAACAACTTCTAATAGGAGGATGAAGGAAATTGATAGAGAGATACATGATTCACTTGAGGGTATCATTGAAAAACGATTGAAAGCCATGAAGAATGGTGAAGCCACCAGTGATGATTTATTAGGCATACTTTTGGAATCAAATCAAATTGAAAAGCAAGGACATGAAAACAGGCAAGAGAGCACTTCATCTTTACTGGTTTGGACGATGGTGTTATTGGCCAAGTATCCTGAATGGCAAGAACGTGCAAGGCAGGAAGTTTTGCAAGTTTTTGGCAACCAAACTCCAAACTTTAATGGGTTAAGTCACCTTAAAATTGTGACCATGGTTTTGTATGAGGTTCTCAGGTTATATCCACCTGCAATTTACTTCAATAGAGCTGTTCAAAAGGATGTGAAACTTGGAATCCTATCACTACCTGCAGGAGTACAAGTTTCCTTGCCAATACTTCTGATTCACCATGATCTTGATATCTGGGGTGATGATGCAAAAGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCAAAGGCCACAAAAGGCCAAGTTTCGTTTTTCCCTTTTGGATGGGGTCCTAGAATATGTATGGGGCAAAACTTTGCCTTGTTGGAAGCGAAAGTAGTATTATCATTGCTTCTGCAGAATTTCTCATTTGAGCTTTCTGCAGCCTATGCTCATGTTCCCACCTCTGTGCTTACTTTGCAGCCAAAACATGGGGCGAAAATCGTTCTGCATAAATTGTAA 1503 0.3979 MEAFSSASILVLTVIVAVIPIWAWQILNSLWLRPKRLEKLLRAQGFQGDPYKLSFDNPKQKYILKMQYEAKSKTIGLSHDVAPQIFSPVHQTVNKYGKNSFLWEDRTPKVIIMDPEQIKEVFNRMQNFPKPKLNSIIKILSVGLIDYEGEKWAKHRKIINPAFHLDKLKNMLPAFLKSGHDMISKWKEMLSSDGTCEIDVWPFLQNLTCDIISRTAFGSSYAEGTKIFELLKRQGYLLMTGGYMNIIPMWWLLPTTSNRRMKEIDREIHDSLEGIIEKRLKAMKNGEATSDDLLGILLESNQIEKQGHENRQESTSSLLVWTMVLLAKYPEWQERARQEVLQVFGNQTPNFNGLSHLKIVTMVLYEVLRLYPPAIYFNRAVQKDVKLGILSLPAGVQVSLPILLIHHDLDIWGDDAKEFKPERFSEGIAKATKGQVSFFPFGWGPRICMGQNFALLEAKVVLSLLLQNFSFELSAAYAHVPTSVLTLQPKHGAKIVLHKL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01950 500 CDD CYP72 86 496 - -
Rops3g01950 500 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 493 - -
Rops3g01950 500 SUPERFAMILY Cytochrome P450 75 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 Pfam Cytochrome P450 83 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Rops3g01950 500 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 Gene3D Cytochrome P450 65 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01950 500 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01950 Rops-Chr3 34781552 34785365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01950 6 500 Cytochrome P450 AT3G14690 50.685 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01950 - K17873 ag:BAL45207 747.658