Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01936 ATGGAGGCATTTTCCAGTGCTTCAATCTTGGTTTTGACAGTGATAGTTGCTGTGATTCCCATATGGGCATGGCAGATACTGAACTCGTTATGGCTGAGGCCAAAGAGGTTGGAAAAGCTTCTCAGAGCTCAAGGTTTTCAAGGTGATCCATACAAGCTTTCATTTGATAACCCGAAGCAAAAGTACATACTGAAGATGCAATATGAAGCTAAATCCAAAACCATTGGTCTCTCCCATGATGTTGCACCACAAATCTTCTCGCCTGTTCACCAAACTGTCAACAAATATGGCAAGAATTCCTTTTTATGGGAAGGTAGAACACCGAAGGTGATCATCATGGACCCAGAACAAATCAAGGAAGTCTTTAACAGGATGCAGAACTTCCCAAAACCAAAGTTAAATTCCATTATCAAGATTCTCAGTGTTGGTCTGATAGATTATGAGGGTGAGAAATGGGCAAAACATCGGAAGATTATCAACCCAGCATTCCACTTAGATAAATTGAAAAATATGCTACCAGCATTTTTGAAAAGTGGCCATGATATGATTAGCAAATGGAAGGAAATGTTGTCATCGGATGGAACATGTGAGATTGATGTTTGGCCTTTCCTTCAGAATTTGACTTGTGATATAATTTCTAGAACAGCTTTTGGAAGCAGCTATGCAGAAGGAACAAAAATATTTGAACTTCTGAAAAGGCAGGGGTATCTTTTAATGACAGGAGGATATATGAACATCATTCCAATGTGGTGGCTTCTACCAACAACTTCTAATAGGAGGATGAAGGAAATTGATAGAGAGATACATGATTCACTTGAGGGTATCATTGAAAAACGATTGAAAGCCATGAAGAATGGTGAAGCCACCAGTGATGATTTATTAGGCATACTTTTGGAATCAAATCAAATTGAAAAGCAAGGACATGAAAACAGTAAGACTGTTGGAATGACCAACCAAGAAGTAATTGAGGAATGCAAGCTATTCTACCTTGCAGGGCAAGAGACCACTTCATCTTTACTGGTTTGGACGATGGTGTTATTGGCCAAGTATCCTGAATGGCAAGAACGTGCAAGGCAGGAAGTTTTGCAAGTTTTTGGCAACCAAACTCCAAACTTCAATGGGTTAAGTCACCTTAAAATTGTGACCATGGTTTTGTATGAGGTTCTCAGGTTATATCCACCTGCAATTTACTTCAATAGAGCTGTTCAAAAGGATGTGAAACTTGGAAACCTATCACTACCTGCAGGAGTACAAGTTTCCTTGCCAATACTTCTGATTCACCATGATCTTGATATCTGGGGTGATGATGCAAAAGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCAAAGGCCACGAAAGGCCAAGTTTCGTTTTTCCCTTTTGGATGGGGTCATAGAATATGTATGGGGCAAAACTTTGCCTTGTTGGAAGCGAAAATAGTATTGTCATTGCTTCTGCAAAATTTCTCATTTGAGCTTTCTGCAGCCTATGCTCATGTTCCCACCTCTGTGCTTACTTTGCAGCCAAAACATGGGGCGAAAATCATTCTGCATAAATTGTAA 1566 0.3978 MEAFSSASILVLTVIVAVIPIWAWQILNSLWLRPKRLEKLLRAQGFQGDPYKLSFDNPKQKYILKMQYEAKSKTIGLSHDVAPQIFSPVHQTVNKYGKNSFLWEGRTPKVIIMDPEQIKEVFNRMQNFPKPKLNSIIKILSVGLIDYEGEKWAKHRKIINPAFHLDKLKNMLPAFLKSGHDMISKWKEMLSSDGTCEIDVWPFLQNLTCDIISRTAFGSSYAEGTKIFELLKRQGYLLMTGGYMNIIPMWWLLPTTSNRRMKEIDREIHDSLEGIIEKRLKAMKNGEATSDDLLGILLESNQIEKQGHENSKTVGMTNQEVIEECKLFYLAGQETTSSLLVWTMVLLAKYPEWQERARQEVLQVFGNQTPNFNGLSHLKIVTMVLYEVLRLYPPAIYFNRAVQKDVKLGNLSLPAGVQVSLPILLIHHDLDIWGDDAKEFKPERFSEGIAKATKGQVSFFPFGWGHRICMGQNFALLEAKIVLSLLLQNFSFELSAAYAHVPTSVLTLQPKHGAKIILHKL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01936 521 CDD CYP72 86 517 - -
Rops3g01936 521 SUPERFAMILY Cytochrome P450 75 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 Gene3D Cytochrome P450 65 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 FunFam Cytochrome P450 734A1 31 521 - -
Rops3g01936 521 Pfam Cytochrome P450 83 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01936 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 514 - -
Rops3g01936 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01936 Rops-Chr3 34529213 34532822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01936 6 521 Cytochrome P450 AT3G14690 52.224 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01936 - K17873 ag:BAL45207 806.208