Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01932 ATGGATAATATAGCAGGTCTGGCTGAGGCTGCAGGGTCAAGATTTAGTTCATTGGAGCTCATTGGACAGGGATCATTCGGGGACGTATATAAAGGGTTTGACAAGGAGCTAAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAGTCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCATTTCTAAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCTATTGGTTGCATTCTACGTGACTTGCTTCATGCGATTGATTACCTACATAATGAAGGAAAGATTCATAGAGACATTAAAGCTGCAAACATCTTATTGACTGAGAGTGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCTCAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGAATTACTGCAATTGAGATGGCGAAAGGGGAGCCGCCACTTGCTGATCTTCATCCCATGAGAGTACTTTTCATCATACCACGAGAGAATCCGCCACAGCTAGATGAGCATTTTTCTCGTTCCATGAAAGAATTTGTTTCATTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTTTTATTCGGAGTGCTAGGAAGAGTCCCAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAGTACCAAATGAAGGAAGATCAGGCGGCACCTACAAATGGTCCTAGAGGGATAGGGGAGGCATCCGATACTATGAAGGTGGCAAGAGATTCAAGAGGTGAAGAAACCAATCAGCGTAGTGATCAAGGTAAAACCCTGAAAAGTTCTGGTTGGGACTTCAGCATTGGTGGATCACAGGGTACTGAAACAATTCGTAGTGTTTCACGACCACCTCAATTTAGAGATAAGAAAACTGAAGTATCAAATCAGCAGCTCAACCAAAGAAAAGTTCCAGAGAGTGGCCATCAAGGTGGATATGCCAATAGGAGTGTACTTAATGAGTCGCTAGAAACTTCTTTTGGAAAAGATCTTGGAGTTCCCTCCCATGATAAGCATCCAGATGACCTTGAAGATGATGAATTGCCTGGGAATGGATCAGGAACTGTTGTTGTTCGGTCTCCGAAAGGATCACAGCTGTCAATGTTCCGTGACCAAAGTTCCCAGTCTAGCAGCAGCTATGCCTCTTTGGAAGATGCTTCTACTAGTGGAACTATTGTTTTGCATAGTCAGCATGATGATTCTGATTCTCCACAGACACCAAGGTCTCGATTGGGACTTAATAGTAGATATTCAAATGCCTCATTGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGACTGCTATCCAAGGAGGATTAAGGAAAGTGAATGCTCGAGAGAGATTTGCCGTGGGGAAACTCAACAACAATGTACAGGAAAGCAGGAGAGATCAAATGTCAAGCAGCTCTGACTCTTCCAGACCATCTCGTGAATCCGTTGATGCACAAAAGGGAATTTCAAGATCACAGTATGCTAGTGATGATGAAGAAAGTGCCAGAATAATGTCATCTTCTGTGCCGTTATCTGTTTTACTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCAATCGTGCAAAATGTTATCAATTCACTTGTAAACATAGAGAAGACCAAGCCTGGATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAAGAATCTTCATTGAAGGACCTGCAAGAACTAGCAGCTCAATTATTCAGCAAGACCAAGTCAGCTGAAGAGACCCGAAATACTGAGGCTGATAACAGGAAGAAACAAAACAAGGAAAATCATTCAAATAGCAGTTTAAGCCCACTCGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAATCCAGCTTGA 2100 0.4214 MDNIAGLAEAAGSRFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIGCILRDLLHAIDYLHNEGKIHRDIKAANILLTESGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRSMKEFVSLCLKKVPAERPSAKELLKHRFIRSARKSPKLLERIRERPKYQMKEDQAAPTNGPRGIGEASDTMKVARDSRGEETNQRSDQGKTLKSSGWDFSIGGSQGTETIRSVSRPPQFRDKKTEVSNQQLNQRKVPESGHQGGYANRSVLNESLETSFGKDLGVPSHDKHPDDLEDDELPGNGSGTVVVRSPKGSQLSMFRDQSSQSSSSYASLEDASTSGTIVLHSQHDDSDSPQTPRSRLGLNSRYSNASLEDSATNLAEAKTAIQGGLRKVNARERFAVGKLNNNVQESRRDQMSSSSDSSRPSRESVDAQKGISRSQYASDDEESARIMSSSVPLSVLLIPSLKEAIADDPEGSIVQNVINSLVNIEKTKPGSCDVLVKKLLQRLASSKESSLKDLQELAAQLFSKTKSAEETRNTEADNRKKQNKENHSNSSLSPLARFLLSRWQGQTSRDLNPA* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01932 699 MobiDBLite consensus disorder prediction 307 325 - -
Rops3g01932 699 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01932 699 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 401 416 - -
Rops3g01932 699 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Rops3g01932 699 SUPERFAMILY Protein kinase-like (PK-like) 12 268 IPR011009 -
Rops3g01932 699 MobiDBLite consensus disorder prediction 277 384 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 653 671 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 326 352 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 427 454 - -
Rops3g01932 699 Coils Coil 636 656 - -
Rops3g01932 699 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01932 699 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 649 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 464 483 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 650 676 - -
Rops3g01932 699 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Rops3g01932 699 MobiDBLite consensus disorder prediction 361 375 - -
Rops3g01932 699 Coils Coil 41 68 - -
Rops3g01932 699 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01932 699 CDD STKc_MST3_like 13 287 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 397 454 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 523 569 - -
Rops3g01932 699 MobiDBLite consensus disorder prediction 524 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01932 Rops-Chr3 34473307 34498585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01932 1 696 MAP Kinase Kinase Kinase Kinase AT3G15220 64.571 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Rops3g01932 Pkinase 7.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01932 K08838 - gmx:100786501 1175.23