Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01929 ATGGTGGGCTCAGGAACATCTGATAGAAGCAAAGAAGCTATTGGGATGATGGCCCTTCATGAGGCCCTTAGAAGTGTATGTCTCAACTCAGATTGGACCTACTCTGTGTTCTGGACTATTCGTCCACGCCCAAGAGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGTTCAGATTGTCTGGAAGAGATTGATGGAGAGGATCCTGTCAGGAAATCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGATTACATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGATCCTAATATTTCTAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATCGAGCAGTTTGAGTCTGGCATTCAGACAATTGCTGTAATCCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCAGAAGATCTCCATTTTGTGTTAAAAATGAGGCACACTTTTGAATCTTTAGGCTATCAATCTGGGTTCTACCTTTCCCAACTCTTCTCTTCAACTAGGAACACTTCCTCTTCTACTTCAGTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCATCCTCACTTCTCAACTGGGGTCAGAGTCCACTTGGATCTGCTACTTCTATGCTGTCCTCACCCAACTTTCAACATGCAGCAAGACTGGGGTTCCCACAGACCAAAGATGAGACCCAAATGCTTCTCATGCCTCATGCATCTGAAACTTCAAGAAGGGAAGACATGACAGGGGAGCATGAAAACAGCATAAAATGGCCAAATGGGTTGCCCTTCTTCAATGCAATCCCTGGAAGTACTAATGATGCTAAGCTTTTGTTTAATCCAGAGAGCTTTGGGAGTAAACAAGGTGATCAGAATCAGCACCAACCTCTTAATCCAAATCTAAGTTCAGCTGCCCCCAACTTGCCAAATGCCAGTGGAGCCAACACCAATGAGTTATTGAGCTTGGATAGCCAACTTGAAGGGGCAAAGAAAATGGGCAAGTTTAATAGGAGCTTTACTCTACCTTCTAGAGTGGCTTCTTCATCATCATCTACTTCAATGGATCACCATCAACAAGCAGCTATGGAGTATAGAAATTCAGGAGGAGGAATGTACCCAGATGTGATGGAGACCTTTTTGGAGTGA 1242 0.4461 MVGSGTSDRSKEAIGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGSSDCLEEIDGEDPVRKSFSKMSIQLYNYGEGLMGKITSDKCHKWVFKEPTECDPNISNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLKMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPSSLLNWGQSPLGSATSMLSSPNFQHAARLGFPQTKDETQMLLMPHASETSRREDMTGEHENSIKWPNGLPFFNAIPGSTNDAKLLFNPESFGSKQGDQNQHQPLNPNLSSAAPNLPNASGANTNELLSLDSQLEGAKKMGKFNRSFTLPSRVASSSSSTSMDHHQQAAMEYRNSGGGMYPDVMETFLE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01929 413 PANTHER GB|AAF34833.1 1 413 IPR044170 -
Rops3g01929 413 MobiDBLite consensus disorder prediction 206 228 - -
Rops3g01929 413 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 74 IPR025610 -
Rops3g01929 413 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 87 186 IPR025610 -
Rops3g01929 413 MobiDBLite consensus disorder prediction 308 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01929 Rops-Chr3 34423184 34426135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01929 20 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.000 1.48e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01929 - - gmx:100814508 666.381