Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01927 ATGACTGGCAGGGAAATCTTTCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGAATGTAACTCATGGCTATCACTTGGTAAAGGGAAGATCAGATCATGCCATGGAAGACTACGTTGTCGCTGAATTTAAGGAAGTTGAAAACAATGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTAGTTTCTTGCAGTCTCATTTGTTTGATAATATCATTAAAGAGCCTGACTTCTGGACAGAACCTGCAGATGCAGTCAAGAGAGCATATACTGCAACTGATTCTACTATTTTAGATAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTGATCAATTGTCAGATGCTAGTAGTGGCCAATATTGGAGATTCTCGGGCTGTCTTATGCAAGAATGGCATCGCCAAACAACTGTCAGTGGATCATGAACCGCACAGAGAAAGTGAGGACATAAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGACGTTCCACGGGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGTCTGAAGAAACACCTGAGCTCAGAACCACATGTGACAGTGGAGATCATAGATGATGATGCAGAGTTTATTATATTAGCCAGTGACGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATAAAAAATATAAAGGATGCTCGATCTGCAGCAAAGAGCCTCACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTTGTGAGATTGCAGTGA 849 0.4193 MTGREIFHKMKEKVLGSSDPDSGKGKSKMSKNVTHGYHLVKGRSDHAMEDYVVAEFKEVENNELGLFAIFDGHSGHSVPSFLQSHLFDNIIKEPDFWTEPADAVKRAYTATDSTILDKSGELGRGGSTAVTAILINCQMLVVANIGDSRAVLCKNGIAKQLSVDHEPHRESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPHVTVEIIDDDAEFIILASDGLWKVMSNQEAVDAIKNIKDARSAAKSLTEEARNRKSSDDISCVVVRLQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01927 282 Gene3D - 16 282 IPR036457 -
Rops3g01927 282 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Rops3g01927 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Rops3g01927 282 CDD PP2Cc 35 281 IPR001932 -
Rops3g01927 282 SMART PP2C_4 24 279 IPR001932 -
Rops3g01927 282 Coils Coil 244 264 - -
Rops3g01927 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Rops3g01927 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Rops3g01927 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01927 Rops-Chr3 34270596 34274311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01927 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.087 1.09e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01927 K17506 - gmx:100787942 486.878