Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01919 ATGCAGCTTATACCTTCAAGGATGTCGTGCAGCTTATACCTTGTTTTTGAGTACATGGAGCATGGCCCGGCTGGGCTTGCGTCACATCCTGGACTGAGGTGTACAGAAGCACAGGTTAAGTGTTGCATGCAGAATTTTTTACGTGGACTTGATCACTGCCACAGCCGTGGTGTACTGCACCGTGACATTAAGGGTTCCAATCTCTTAGTTGACAACAATGGAATCTTAAAAACTGCAGACTTTGCATCTGCTTTGAAGAATAAGTTCTTCTCCTTGAAGCCTCTACCGTGTGGTCCTTCGAGCTTGCCGAGATATCCTCCCAGCAAAGAATTTGATGCTAAGCTGGCTGAGTTTCTTGCTCTTTATGATATCCATGTCACTTTCCTCAACACCGAGTACATTCACCGATGCCTCATTCGTTTCACTGATATTGAAGCTCTTTCAAGATGCTACCCTTCTCTTCAATTCAAAACCATTCGTGATTTTTATGCAGAGGACCAGCATCCAGGATTTGGAGCCCAAACAACTGATGTCATTGAGTCCATGAACTTGTACGACAAGCCAATCTTGAAAGATTTTCTTGCCTCCGAGAGTCAGGGAATACCGAGAATCAGTTGCATGATAGTGGATGGGATCTATGGAGACCTTACCACTGACTTGGCTGTTGAATTTGGGATACCACTCATTCACTTTCGTACGGTCAGTGCATGTTGCTTTTGGTCTTATTTATGTGTTCCAAAGCTCTTTGAGTCCAACGAACTTCCCATTAGAGGTATATATGCATTCAGAGCTAGAAATGAGGACATGGATCGCATCATCAGGAATATGCCAGGCATGGAAATGAGGCGCCATGCTTTGCGGAAGAGAGAGGAGTTGCTTCAGAGGCTTGGAATGCGTCAAGAACTGTCTTCGGATGGAGGTGGTTTATACTGA 933 0.4491 MQLIPSRMSCSLYLVFEYMEHGPAGLASHPGLRCTEAQVKCCMQNFLRGLDHCHSRGVLHRDIKGSNLLVDNNGILKTADFASALKNKFFSLKPLPCGPSSLPRYPPSKEFDAKLAEFLALYDIHVTFLNTEYIHRCLIRFTDIEALSRCYPSLQFKTIRDFYAEDQHPGFGAQTTDVIESMNLYDKPILKDFLASESQGIPRISCMIVDGIYGDLTTDLAVEFGIPLIHFRTVSACCFWSYLCVPKLFESNELPIRGIYAFRARNEDMDRIIRNMPGMEMRRHALRKREELLQRLGMRQELSSDGGGLY* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01919 310 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 114 267 - -
Rops3g01919 310 SUPERFAMILY Protein kinase-like (PK-like) 9 87 IPR011009 -
Rops3g01919 310 Pfam Protein kinase domain 11 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01919 310 ProSiteProfiles Protein kinase domain profile. 1 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01919 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 58 70 IPR008271 GO:0004672|GO:0006468
Rops3g01919 310 Gene3D Glycogen Phosphorylase B; 113 298 - -
Rops3g01919 310 Gene3D Transferase(Phosphotransferase) domain 1 19 84 - -
Rops3g01919 310 PANTHER CELL DIVISION PROTEIN KINASE 11 85 - -
Rops3g01919 310 Gene3D Phosphorylase Kinase; domain 1 7 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01919 Rops-Chr3 33927801 33928925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01919 6 84 Core Cell Cycle Gene Families AT5G10270 56.962 1.99e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops3g01919 Pkinase 3.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01919 - - ccaj:109800808 201.83