Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01915 ATGCACTCTCACGTTGAACTCCCATGCAAGCCACTCTTTGAGCAACAGGTTAGAGATTTATGTGAGAAGGCTAAGGAGATTTTAATGGATGAAAGTGATGTCCAGCCTGTGAAAAGCCCTGTGACAAGTTGTGGTGGTATTCATGGGCAGTTTCACGATCTTGCTGAACTATTTCGAATTGGTGGGAAGTGTCCAGATACAAACTACTTGTTTATGGGTAATTATGTGGACCGTGGTCATTATTCAGTTGAGACTGTAACACTCCTCGTGGGCCTCATCGCGGTGATCGTCGTGGGGGTTTTAGCAATGGTGGAAACTGCCACCCAAGTCAGCCACGGGTGTAGAGAGCTTGTGGACCCTGCCCAAGCCAAAGCTCCTGTTCAGGCTCACTTTGGAGACCTGGATAATTTTGTTGGCTTTTCAGATGTTATTGCTGCCAAGGCCTTGGAGGAGAAGCTGAAGGCATCTGGAGTTCCATATGAGCTGAAGCTGCGTCAACTGAAGGTTGAAAGTCTTAGGTCAGGGACTGGATGGCAAGCTGATGGGCGGTTCGTGATTAACTCTTCTACGCGATGTGATGTACAGGGACTTGTTGAAGCAACGGAGGCACGACGTCGTAGCACATCCTAA 630 0.4841 MHSHVELPCKPLFEQQVRDLCEKAKEILMDESDVQPVKSPVTSCGGIHGQFHDLAELFRIGGKCPDTNYLFMGNYVDRGHYSVETVTLLVGLIAVIVVGVLAMVETATQVSHGCRELVDPAQAKAPVQAHFGDLDNFVGFSDVIAAKALEEKLKASGVPYELKLRQLKVESLRSGTGWQADGRFVINSSTRCDVQGLVEATEARRRSTS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01915 209 PRINTS Serine/threonine phosphatase family signature 69 96 IPR006186 GO:0016787
Rops3g01915 209 PRINTS Serine/threonine phosphatase family signature 40 67 IPR006186 GO:0016787
Rops3g01915 209 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 9 92 IPR047129 GO:0004722
Rops3g01915 209 SUPERFAMILY Metallo-dependent phosphatases 8 92 IPR029052 -
Rops3g01915 209 Gene3D - 1 95 IPR029052 -
Rops3g01915 209 SMART pp2a_7 12 201 IPR006186 GO:0016787
Rops3g01915 209 Pfam Dienelactone hydrolase family 110 164 IPR002925 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01915 Rops-Chr3 33798474 33799498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01915 39 90 Calmodulin-binding Proteins AT5G63870 45.283 6.70e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01915 K04382 - ath:AT3G58500 150.599