Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01911 ATGGAGTTTCAGAGACCTCTATGCCTCTTCTTTGTTCTCTTTACTCTTCTTTCTAGCTCACAAGCCCACAAATTCGACGTTGGTGGAAGTGATGGATGGGTTCCAAACCCTTCCGAGAGTTACAACCAATGGGCTGGAAGGAAAAGGTTCCAAGTCAATGATACTATAGTTTTCAAGTACAAGAAGGGTTCGGATTCAGTGTTGGAAGTGAAGAAGGAGGATTATGACAAGTGCAACAAGACAAACCCAATCAAGAAGTTTGAAGAGGGTGACACTGAGTTCAAGTTGGATCGACCAGGACCATTCTATTTCATTAGTGGAAAAGATGGAAACTGTGAAAAGGGTCAAAAGTTAATCGTTGCTGTTTTGGCACCACGAGGATCAACACAAACACCACCACCACGACCACAACCACCCTTTGTTCCAAGTCCAACATCACCACCAAAATCTTCACATTCACCATCACCTAGTGGTGGTGGCGTTTCACCAGTTCCACCATCTGGGTCACCGCCGGCGATGCCACCGACCTCCGTTTCACCGTCTCCGGCGGGATTTCCTCCGTCTGTGTCGCCATCTCCGGTGGGTACGCCTCCGGCGGGTTCTCCTGTGCCGGCCGGTGGACCTACGGCTACATCTCCGGCGCCGACAGCTACATCTCCGTCTCCGTCTCCTATTAGCACCCCACATGCCGGTGGACCTTCTGCCTCAACTCCGTCGCCGGCAGCTACATCACCGTCTCCGTCTCCGATTAGCACCCCACCTGCCGGTGGACCCTCTGCCTCAACTCCGTCGCCGGCAGCTACATCACCGTCTCCGTCTCCGATTAGCACCCCACCTGCCGGTGGACCTTCTGCCTTAACTCCGTCACCGGCAGCTACCTCTCCGTCTCCGATGAGTACCCCACCGTCTCCGTCTCCGATGAGTACCCCACCTGCCGGTGGACCTCCGGCACCGTCTCCGGGATCCGGTGCTACACCTCCGTTGCCACCGGGGGCAGCTCCGTCGCCGGGGTCTTCTTCTTCTAATTCTACGGCGCCGCCACCGGGAAATAGTGGGTCATCTGTGTCTCCTTCGAGCTTTTTGGTGTTTTCAGTTTCCGTTGTTGTTGGTGCTGCTTTGTTGTGTTACGACACCGTTTTGCGTTGA 1146 0.5454 MEFQRPLCLFFVLFTLLSSSQAHKFDVGGSDGWVPNPSESYNQWAGRKRFQVNDTIVFKYKKGSDSVLEVKKEDYDKCNKTNPIKKFEEGDTEFKLDRPGPFYFISGKDGNCEKGQKLIVAVLAPRGSTQTPPPRPQPPFVPSPTSPPKSSHSPSPSGGGVSPVPPSGSPPAMPPTSVSPSPAGFPPSVSPSPVGTPPAGSPVPAGGPTATSPAPTATSPSPSPISTPHAGGPSASTPSPAATSPSPSPISTPPAGGPSASTPSPAATSPSPSPISTPPAGGPSALTPSPAATSPSPMSTPPSPSPMSTPPAGGPPAPSPGSGATPPLPPGAAPSPGSSSSNSTAPPPGNSGSSVSPSSFLVFSVSVVVGAALLCYDTVLR* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01911 381 FunFam Early nodulin-like protein 1 22 127 - -
Rops3g01911 381 PANTHER BLUE COPPER PROTEIN 24 208 IPR039391 GO:0009055
Rops3g01911 381 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Rops3g01911 381 MobiDBLite consensus disorder prediction 240 285 - -
Rops3g01911 381 MobiDBLite consensus disorder prediction 126 357 - -
Rops3g01911 381 MobiDBLite consensus disorder prediction 129 151 - -
Rops3g01911 381 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Rops3g01911 381 CDD OsENODL1_like 23 123 IPR041846 -
Rops3g01911 381 MobiDBLite consensus disorder prediction 159 204 - -
Rops3g01911 381 Gene3D - 21 126 IPR008972 -
Rops3g01911 381 MobiDBLite consensus disorder prediction 335 357 - -
Rops3g01911 381 MobiDBLite consensus disorder prediction 294 334 - -
Rops3g01911 381 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Rops3g01911 381 MobiDBLite consensus disorder prediction 223 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01911 Rops-Chr3 33693594 33695624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01911 3 202 Phytocyanin Superfamily AT5G53870 50.490 6.13e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01911 - - gmx:100795901 223.787