Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01898 ATGTCTTCATCGTATACCGAAAATGCAATGGCCGCAGTTGTTCTTACACCTTTTGCTCTATTTTTTGAAAGGAATGTGAGGCCCAAGATGGCTTTCCCCGTCTTCTGGAGAATAATGCTGCTGGGAGGTCTAGAGATAGAGCAGCTAAGGATAAAAGAGGTGCGAAGTAAAGCAAAGGTGATTGGAACATTAATAACCTTTGCAGGTGCTCTGTTTATGGCTATCTACAAAGGTCCCATACTTAACAATTTTGGGTCATCCCATGAAAATGACACCAACTTCGACGGCTACCATTGGATTTTTGGTACTATTTTTCTCAGCATAGCTTGTGCCGGCTGCTCCACTTTCTCCATATTGCAGTCAATGGTGCTAACAAAGTATCCAGCAGAAATGTCGCTCTCATGCTGGATATGCTTCCTAGGAACAATAGAAGCTGTGGGTATTGCAATTGCATTTGAGCATAATCCTCGTGCATGGGCCATCGGTTGGGACGTGAGGCTTTTCGCTCCACTGTACGCTGGAGTGGTAACCACAGGGATTATGTTCTACGTGCAAGGGGTAGTGATACGAACCAGAGGACCTGTATTTGTTACAGCATTTAATCCTCTGCGCGTCATTATTGTGTTTGTCTTGGCCTTCCCCATCTTGCACGAAACACTCTACCTTGGATGTGTTATTGGAAGCGTTGTAGTTTTTATTGGCGTGTACATTGTAATTTGGGGCAAAGGCAAAGACCGTGATGACCAGAAGTTGGCAACTGAGACCCAAGGCACAGCTACTGTACCCGAATCAAACTCGCCATTTGACAAGCCCTAG 816 0.4522 MSSSYTENAMAAVVLTPFALFFERNVRPKMAFPVFWRIMLLGGLEIEQLRIKEVRSKAKVIGTLITFAGALFMAIYKGPILNNFGSSHENDTNFDGYHWIFGTIFLSIACAGCSTFSILQSMVLTKYPAEMSLSCWICFLGTIEAVGIAIAFEHNPRAWAIGWDVRLFAPLYAGVVTTGIMFYVQGVVIRTRGPVFVTAFNPLRVIIVFVLAFPILHETLYLGCVIGSVVVFIGVYIVIWGKGKDRDDQKLATETQGTATVPESNSPFDKP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01898 271 Pfam EamA-like transporter family 101 239 IPR000620 GO:0016020
Rops3g01898 271 MobiDBLite consensus disorder prediction 250 271 - -
Rops3g01898 271 MobiDBLite consensus disorder prediction 253 271 - -
Rops3g01898 271 PANTHER WAT1-RELATED PROTEIN 31 246 IPR030184 GO:0016020|GO:0022857
Rops3g01898 271 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01898 Rops-Chr3 33223900 33226935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01898 7 245 Nodulin-like Gene Family AT2G37460 41.135 1.38e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01898 - - fve:101300975 264.233