Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01896 ATGGGTGGTTCAGGAAGTTGGTTTAAATCATTTATCTCTCTCAAAAAGTTCTCCATGAATGATCAAGAGAAGGGTAGTGATAAGAGTAAGAGAAAGTGGAGGTTGTGGGGGAGTTCTTCAGAAGGGTTTGGTTTTGGATCCTCCATGAAGAATGGTGGTGGTGCTTGTGACAAGCCTTGTTGTTCTTCATTTGTGGTGAATAAAGAAGCATTTGCTGCTGCAGTGGCCACTGTGGTACGAACTCCACACAAAGACTTTGTGATGATCAAGCAGGAATGGGCTGCCCTTCACATTCAGGCTGTGTTTAGAGGCTTCTTGGCAAGATGA 327 0.4434 MGGSGSWFKSFISLKKFSMNDQEKGSDKSKRKWRLWGSSSEGFGFGSSMKNGGGACDKPCCSSFVVNKEAFAAAVATVVRTPHKDFVMIKQEWAALHIQAVFRGFLAR* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01896 108 ProSiteProfiles IQ motif profile. 91 108 IPR000048 GO:0005515
Rops3g01896 108 Pfam IQ calmodulin-binding motif 93 108 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01896 Rops-Chr3 33114929 33115255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01896 1 108 IQD Protein Family AT1G72670 49.107 1.43e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01896 - - tpra:123889504 139.813