Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01880 ATGAGTGAACCCCTTGCGGTGGCAGTGAGCCTTGATGAAGAGACTGGAGTTGGATCTGGCCCAAAGCCTTCTAAGGATGATCTTCATCAGCTGCCTCAGGAAAAACGGGTGAATGTAACAGTTGGTCGGAGTGTTTTTGAATTAGATTATACCCCACTTTGGGGGTTCATATCTTTGTGTGGGAGAAGACCTGAAATGGAAGATGCAGTTGCAACTATACCTCAATTTATGAAAATTCCTATTCAAATGCTAATCGGCGATCGGGTACTCGATGGAATAAACGAGTGTTTTAATCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTTGGGTGGCCAAGTATTGTCGTGATCGTATCCATCCAGCCTTGGGTGAGGAAATAGGTTTTGTCAAGGAAGTTGCTAATTGTGGTGATTCAAGAGCGGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAATCAAACCGAGATGATGAGTATGCAAGAATTGAGGCAGCTGGAGGAAAGGTTATACAATGGAATGGTACTTCACTTATGGACCAGCTCTTATGA 579 0.4439 MSEPLAVAVSLDEETGVGSGPKPSKDDLHQLPQEKRVNVTVGRSVFELDYTPLWGFISLCGRRPEMEDAVATIPQFMKIPIQMLIGDRVLDGINECFNQQMTHFFGVYDGHGGSWVAKYCRDRIHPALGEEIGFVKEVANCGDSRAVLCRGKEPMALSVDHKSNRDDEYARIEAAGGKVIQWNGTSLMDQLL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01880 192 PANTHER PROTEIN PHOSPHATASE 138 182 IPR015655 GO:0004722|GO:0006470
Rops3g01880 192 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Rops3g01880 192 Gene3D - 44 137 IPR036457 -
Rops3g01880 192 SUPERFAMILY PP2C-like 41 183 IPR036457 -
Rops3g01880 192 MobiDBLite consensus disorder prediction 1 32 - -
Rops3g01880 192 SMART PP2C_4 43 192 IPR001932 -
Rops3g01880 192 Pfam Protein phosphatase 2C 79 134 IPR001932 -
Rops3g01880 192 Pfam Protein phosphatase 2C 138 185 IPR001932 -
Rops3g01880 192 Gene3D - 138 192 IPR036457 -
Rops3g01880 192 ProSiteProfiles PPM-type phosphatase domain profile. 53 192 IPR001932 -
Rops3g01880 192 CDD PP2Cc 58 183 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01880 Rops-Chr3 32852801 32853558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01880 33 191 PP2C-type Phosphatase Gene Family AT4G26080 44.762 9.00e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01880 K14497 - gmx:100805281 285.804