Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01876 ATGCTCTCTTGCTTTGGATCATTTGGTGAATTTGCATACCTATGTTCTATGCTAGAAATATTTACTAAGGTTTCTCCATTTTATACAGGAAGTTCCAGGATGGAAGGAAAGAGAGTCTTTGGAGGCCCATGGCAGTTTATTGGCCTTATGCCTCTGTTTGACCCACCTAGGCATAACAGTGCAGAAACAATAAGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAACTAGCTATAGGAAAGGAAACAGGTCGCCGCTTGGGAATGGGTACCAATATGTATCCTATTCCAGTAATTGTTCAAGAAATTTCACAAGGTACAAATTTCTTATATGGCTCAATGTGGATGGAAAAATTGGAACCATAA 381 0.3963 MLSCFGSFGEFAYLCSMLEIFTKVSPFYTGSSRMEGKRVFGGPWQFIGLMPLFDPPRHNSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPIPVIVQEISQGTNFLYGSMWMEKLEP* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01876 126 Gene3D - 54 107 IPR023214 -
Rops3g01876 126 Gene3D - 41 53 IPR023299 GO:0000166
Rops3g01876 126 SUPERFAMILY HAD-like 44 96 IPR036412 -
Rops3g01876 126 PRINTS P-type cation-transporting ATPase superfamily signature 48 59 - -
Rops3g01876 126 PRINTS P-type cation-transporting ATPase superfamily signature 70 80 - -
Rops3g01876 126 PANTHER CALCIUM-TRANSPORTING ATPASE 37 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01876 Rops-Chr3 32675758 32676741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01876 37 100 Primary Pumps ATPases AT5G62670 92.188 5.76e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01876 K01535 - csv:101211115 127.487