Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01826 ATGTCAGAAGCTGTCAAGTGGGCACCATTGATTCTAGCTTTTCTTCTGTACTTGGGTAAGGAATCATTTGCCTCATTCACTCCCATTGATAATTATTTGGTAGTTTGTGGTTCTTCCAACAACGTCACCTTTGAGGGTCGAACTTTCATTCCTGACTCTCAACATTCCAAAACTGAAATAAAAGCCAACACATCTGTGCTAGTTACCTCTAAACTCAATGTCCCTTCTCCACTCTATCAGTCAGCTCGACTCTTCTTGGACAAGGCTACATATATATTCAAAATTCAACAATATGGGAGGCATTGGATCCGCCTCTATTTTCACCCTTTTAATAGTACCGATCACAAAATGTTCTCTGCCTCAGTAACTGTAGTCACTGAGAGTTGTGTGCTTCTCAATAATTTCACATTCATGAACTATAGTGGCTCTCACTTGTTCAAGGAGTATGCAATCAGTGTTACATCCAATGAGTTGTTTCTCACATTCATCCCTCACCACAATTCACTTGCCTTTGTTAATGCTATTGAAGTTGTCTCTATGCCAGATGTGCTGTTCCCAGACTATCTAAATCCATCTACCCTTTCAGAATGCGCCCTTGAAACAGTTTACAGGTTGAATGTTGGTGGTGCATCTCTCAGTGCTCAAAATGACACCCTTGGTAGAAGTTGGGAGAATGATGAAACTTACTTTCATTCCAACAACACTGCTATTAATGTCTCAACAAACATTTCTGCTATAAAGCATCCTGATTTTTTACCAATTACAGCACCGCCATTGGTTTATGCTACTGCCAAAGCCCTGGGAAGTGCCTCATGGGGGTCCGATTTAAATTGGGATTTCTCTTTAAGCCCAAACAATTTGTATTTAATTCGGGTGCATTTCTGTGACATAATTAGTAAGTCTCCTAACAACTCTCTGGCTCTTTGTCTGAAGTTAAATGGAGTCATTACTCTTGGAAATCTCGACCTTTTATCAATTACTGGTGACCTCGCTGAGCCATATTTCAAGGACTTTGTGTTCAATGCATCACAAAACACTCTGAGAATAAGTGTTGCTCCAATGTTTGGTACTGCAAATGCAACCATGAATGGGTTGGAGATAATGAAGATCAGCAACAAAGTTTGGAGTTTAGATGGGATACCCTCTGACGGGAATATTCTTACAAAATCATCAGAAAGAAGTAAAAAGTTAAAACCAGTCATTATAATTGGCTGCAGTGTGTGTATTTTTACATTTTTGGCAATTCTTGGACTATGTTGTTACTTTAAAGCTCGTAGGTCAAAGAAAAAATCAGCAATTAGTTTCGGATTTCTGAGACAATTTACTTTCCTTGATATCCAACAAGCAACCAATGATTTTGATGCTAACCTGCTTATTGGAGAAGGAGGATTTGGGAAGGTCTATAAAGGAACACTAGAAAATGGGAAAACAGTAGCCATCAAAGTAGCAAATCATGAATCAAGACAAGGTCTCCATGAATTCAATAACGAGATAGAATTGTTAGATGGACTTTATCATCGGAACCTTGTTTCTCTTGTAGGTTGCTGTAGTGAAGACTCAAAACTGATTTTAATATACAAATACATGGCAAATGGATCTCTCAACAGTCATCTCTATGGGAGAGACTTTGTTCCACTATCTTGGAAGCAACGCCTTGAGATATGTATTGGGGCTGCAAGGGGACTTTGTTATCTTCACACTGGAGCTAAACAAAACATCATTCATCGTGATGTGAAGGCATCAAACATTCTGTTGGATGAAAATCTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAGAAGGGTCCTCTTCTTGATAAGAGCCATGTGACAACCAATGTAAAGGGTAGCTTTGGTTATGTTGATCCTGAGTATTTTAGAACTAAGTATCTCACTAAGAAATCAGATGTTTACTCATTTGGGGTGGTGTTGATTGAAGTTATATGTGGCAAGCCTGCTTTAGATGATGCCCGTCCAACAGAGCAAATGAATTTGGCTGTGTGGGCTATAAGCTGCCATGAGAAGGGTACCTTCCATGAATTGATGGATCCATATTTGATTGGAAAAGTGAATATGGAATCTGTAAACAAGGTTTCTGAGTTGGCTTGGAAATGCTTGGAGGAGCGTCGGGAGAATAGGCCACCTATGGGGTATGTGTTGTGTGAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCACAAGTTTGGAATGGTAATGGGGATTCTGTTACACATGCCAATGTTGAAAATGGATTCACAGATGATATAGAAGATGTTGCTTGA 2283 0.3947 MSEAVKWAPLILAFLLYLGKESFASFTPIDNYLVVCGSSNNVTFEGRTFIPDSQHSKTEIKANTSVLVTSKLNVPSPLYQSARLFLDKATYIFKIQQYGRHWIRLYFHPFNSTDHKMFSASVTVVTESCVLLNNFTFMNYSGSHLFKEYAISVTSNELFLTFIPHHNSLAFVNAIEVVSMPDVLFPDYLNPSTLSECALETVYRLNVGGASLSAQNDTLGRSWENDETYFHSNNTAINVSTNISAIKHPDFLPITAPPLVYATAKALGSASWGSDLNWDFSLSPNNLYLIRVHFCDIISKSPNNSLALCLKLNGVITLGNLDLLSITGDLAEPYFKDFVFNASQNTLRISVAPMFGTANATMNGLEIMKISNKVWSLDGIPSDGNILTKSSERSKKLKPVIIIGCSVCIFTFLAILGLCCYFKARRSKKKSAISFGFLRQFTFLDIQQATNDFDANLLIGEGGFGKVYKGTLENGKTVAIKVANHESRQGLHEFNNEIELLDGLYHRNLVSLVGCCSEDSKLILIYKYMANGSLNSHLYGRDFVPLSWKQRLEICIGAARGLCYLHTGAKQNIIHRDVKASNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYVDPEYFRTKYLTKKSDVYSFGVVLIEVICGKPALDDARPTEQMNLAVWAISCHEKGTFHELMDPYLIGKVNMESVNKVSELAWKCLEERRENRPPMGYVLCELEEALHLELASQVWNGNGDSVTHANVENGFTDDIEDVA* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01826 760 SUPERFAMILY Protein kinase-like (PK-like) 431 723 IPR011009 -
Rops3g01826 760 FunFam Receptor-like protein kinase FERONIA 529 744 - -
Rops3g01826 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Rops3g01826 760 CDD STKc_IRAK 459 720 - -
Rops3g01826 760 Gene3D Phosphorylase Kinase; domain 1 422 528 - -
Rops3g01826 760 FunFam receptor-like protein kinase FERONIA 421 528 - -
Rops3g01826 760 ProSiteProfiles Protein kinase domain profile. 453 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01826 760 Pfam Protein tyrosine and serine/threonine kinase 458 719 IPR001245 GO:0004672|GO:0006468
Rops3g01826 760 Pfam Malectin-like domain 36 370 IPR024788 -
Rops3g01826 760 ProSitePatterns Protein kinases ATP-binding region signature. 459 481 IPR017441 GO:0005524
Rops3g01826 760 FunFam Putative receptor-like protein kinase 31 181 - -
Rops3g01826 760 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 198 725 - -
Rops3g01826 760 Gene3D - 197 372 - -
Rops3g01826 760 Gene3D - 31 180 - -
Rops3g01826 760 Gene3D Transferase(Phosphotransferase) domain 1 529 740 - -
Rops3g01826 760 SMART serkin_6 453 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01826 Rops-Chr3 31382637 31384919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01826 26 748 Receptor kinase-like Gene Family AT4G39110 42.548 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops3g01826 Malectin_like 4.3e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01826 - - tpra:123883851 917.146