Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01824 ATGGTTTATATTCTTGCACCAACAGTTGCAAATAGCAGACAAACTAGAGTGGTAGTTCTTTCAAATCTGTGGGCTTGGAGAAAATATGGTCAAAACCTTATTAAAGGTTCACCTTATCCCAGTGATTCTTATCCTTCTCTTTTGATGTTATCAGGGTTTATCATAGATGCACCAGTTCAAAAGATGGAAGACATAGAGAAACAACTTGAGATGAATGAAGGAGAATTCAATGATGGACTGCCTCACAAGCCATCTATGATGAATGATAGTAACCAATTTGAGGACTTCTTTGTAGAATTAGGAGAAATAGAAGCTAACCCACTAAACATTTTGTTTACACAAGGTTTTGATGCAGTTGAAGATCAGAGGGAATCCAAGGCCTTAGATCCATTGTATCTATTTGACTAG 408 0.3676 MVYILAPTVANSRQTRVVVLSNLWAWRKYGQNLIKGSPYPSDSYPSLLMLSGFIIDAPVQKMEDIEKQLEMNEGEFNDGLPHKPSMMNDSNQFEDFFVELGEIEANPLNILFTQGFDAVEDQRESKALDPLYLFD* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01824 135 Gene3D WRKY domain 8 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops3g01824 135 ProSiteProfiles WRKY domain profile. 15 81 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops3g01824 135 SUPERFAMILY WRKY DNA-binding domain 16 44 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01824 1 44 WRKY Transcription Factor Family AT1G30650 59.091 4.87e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops3g01824 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01824 - - aprc:113852911 122.094