Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01819 ATGGTCGAGATCATGGAGTGCATGAAGAAGCTCATAAGTGGCCAGCGTGTTCAAGTCCCCATTTATGACTTCAAGAAGCACCAACGCTCTTCTGATAGTTTTCGTCAGGTCAATGCCTCGGATGTCATTACCTTGGAGGGAATTCTTGTATTCCATGAGCAAGGTTTCAGGGATCTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGCGGCTTGTTCGTAGAATTAGACGTGACACAGTGGAGAAGGGCAGGAATATAAACTCTACCTTGCTCCAGTTGCAAAGGTGGTATCACCATGCATCCATGCACTCCCACGATTCCTAA 333 0.4565 MVEIMECMKKLISGQRVQVPIYDFKKHQRSSDSFRQVNASDVITLEGILVFHEQGFRDLMNMKIFVDTDADVRLVRRIRRDTVEKGRNINSTLLQLQRWYHHASMHSHDS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01819 110 PANTHER URIDINE KINASE 4 94 - -
Rops3g01819 110 Pfam Phosphoribulokinase / Uridine kinase family 4 98 IPR006083 GO:0005524|GO:0016301
Rops3g01819 110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 95 IPR027417 -
Rops3g01819 110 Gene3D - 1 108 IPR027417 -
Rops3g01819 110 PRINTS Uridine kinase signature 71 81 - -
Rops3g01819 110 PRINTS Uridine kinase signature 85 96 - -
Rops3g01819 110 PRINTS Uridine kinase signature 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01819 Rops-Chr3 31242712 31243044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01819 3 103 PRT Gene Family AT5G40870 68.317 7.32e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01819 K00876 - gmx:100780005 153.68