Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01809 ATGGCAGCAACATTGATGGCAGCCACAAGCACTGGCACTGTTCTTAAACCAACCCCTTTTCTTGGCCAAAGTAGGGGAACTAATGCCAACCCTCTTAGAGATGTTGTCTCCATGGGAGTTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTAGGACCCTTTTCAGCTCAGACTCCTTCATACTTGACTGGAGAATTCCCTGGAGATTATGGATGGGACACTGCTGGATTGTCTGCTGACCCTGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTGATCCATGGACGTTGGGCTATGCTTGGAGCACTAGGTTGCATCACCCCTGAAGTACTTGAAAAATGGGTTAAAGTTGATTTCAAAGAACCAGTTTGGTTCAAAGCTGGAGCTCAAATATTCTCAGAAGGTGGTCTTGATTACTTGGGCAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCAGTTCTAGGCTTCCAAGTTGTTCTTATGGGACTTGTTGAAGGATACAGAATCAATGGTCTTCCTGGAGTAGGAGAGGGTAATGATCTATACCCTGGTGGTCAATACTTTGACCCTCTTGGTCTTGCTGATGATCCTGTCACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTGACTGGAAAGGGACCACTTGAGAACCTTTTGGATCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGCGCCTGGTTCTTAA 807 0.456 MAATLMAATSTGTVLKPTPFLGQSRGTNANPLRDVVSMGVGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01809 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 267 IPR001344 GO:0009765|GO:0016020
Rops3g01809 268 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Rops3g01809 268 SUPERFAMILY Chlorophyll a-b binding protein 49 265 - -
Rops3g01809 268 Gene3D Chlorophyll a/b binding protein domain 57 261 - -
Rops3g01809 268 FunFam Chlorophyll a-b binding protein, chloroplastic 57 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01809 Rops-Chr3 31062499 31064577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01809 13 267 Chloroplast and Mitochondria Gene Families AT2G05070 68.182 2.50e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01809 K08914 - cave:132175650 531.946