Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01801 ATGGAAGCAACATGGGCTACAAGTGCAGGCATAATAATTTTGATGGTGATTCTTGCTCTGATATGGGCATGGAGGGTGTTGAACTGGTTATGGCTAAGGCCAAAGAAGCTAGAGAAGCTGCTAAGAGAACAAGGCCTTCAAGGGAATTCTTATAAGCTTTTAGTTGGGGACTTAAAGGAGATTCTGAAGATGAGAAAGGAAACCCAATCCAAACCCATGAATCTCTCCGATGATATAGTACCTCGTGTGTCTGCCTATTTCCAACAAAGTGTCATCAAACACGGAAAGAATTCTTTTATCTGGTTTGGACCAACACCAAGGGTGACCCTCACAGATCCTGAGCTAATCAAAGATGTGCTTAACAAGATCTATGACTTCCCAAAGCCTGAAGTGAAATCGCTTGTCAGGTTCATAGCTACTGGTCTTGTAAATCATGAGGGAGAAAAGTGGAGCAAGCATAGAAGGATAATCAACCCTGCATTCAATTTAGAAAAATTGAAGATCATGTTACCAATATTCTTCAAAAGTTGCAACGATCTGATAGGCAAATGGGAGGGAATGTTGTCTTCAGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAAAATTTGGCTAGTGATGTAATTGCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTTCAAAAAGAGCAAGCTGAACTTACAATGAAAATTATGGTGAAAGTTTACATCCCTGGGTGGAGGTTTCTACCTACAACTACCCATAGGAGGATGAAGGAAATTGACAGAGATATAAATGCTTCACTTAAGGATATGATTAACAAGAGAGAGAAAGCATTAAAGGCGGGTGAAGCAACTAAGAATAACTTGTTAGATATTCTTTTGGAGTCAAATCACAAGGAAATTCAAGAACATGGGAACAATAAGGATGTTGGAATGAATCTTGAAGATGTAATCGAAGAATGTAAGATATTCTACTTTGCAGGACAGGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTATCCTGACTGGCAAGAACGTGCAAGGGAGGAAGTGTTTCAAGTCTTTGGCAACCAAGAACCAGATTTTGATGGGCTAAGTCGCCTTAAGATTGTCACCATGATTTTGTATGAGGTTCTTAGATTATACCCACCAGTAATTGGGCTTGCTCGAACTGTTCACAAAGATGTGAAACTTGGAAACCTTACATTACCTGTTGGAGTGCAAGTTTTCTTACCAATAGTTTTGCTTCACCATGATTGTGAACTTTGGGGTGATGATGCTAAGGAATTCAATCCTGAGAGATTTTCAGAGGGAGTTTTAAAGGCAACAAATGGCAAAGTTTCATTTTTTCCATTTGGAGGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCCTGTTGGAAGCAAAGATGGCTTTGTCACTGATTTTACAACATTTCTCATTTGAACTTTCTCCAACCTATGCTCATGCTCCAACTACAGTAATTACTCTTCAGCCACAATATGGTGCTCAAATGATTCTACGTAAAGTGGAAACATGA 1566 0.3927 MEATWATSAGIIILMVILALIWAWRVLNWLWLRPKKLEKLLREQGLQGNSYKLLVGDLKEILKMRKETQSKPMNLSDDIVPRVSAYFQQSVIKHGKNSFIWFGPTPRVTLTDPELIKDVLNKIYDFPKPEVKSLVRFIATGLVNHEGEKWSKHRRIINPAFNLEKLKIMLPIFFKSCNDLIGKWEGMLSSDGSCEMDVWPFLQNLASDVIARTAFGSSYEEGRRIFQLQKEQAELTMKIMVKVYIPGWRFLPTTTHRRMKEIDRDINASLKDMINKREKALKAGEATKNNLLDILLESNHKEIQEHGNNKDVGMNLEDVIEECKIFYFAGQETTSVLLVWTMVLLSRYPDWQERAREEVFQVFGNQEPDFDGLSRLKIVTMILYEVLRLYPPVIGLARTVHKDVKLGNLTLPVGVQVFLPIVLLHHDCELWGDDAKEFNPERFSEGVLKATNGKVSFFPFGGGPRICIGQNFSLLEAKMALSLILQHFSFELSPTYAHAPTTVITLQPQYGAQMILRKVET* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01801 521 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 512 - -
Rops3g01801 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Rops3g01801 521 SUPERFAMILY Cytochrome P450 84 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 Pfam Cytochrome P450 90 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01801 521 CDD CYP72 86 515 - -
Rops3g01801 521 FunFam Cytochrome P450 734A1 31 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01801 Rops-Chr3 30852289 30859737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01801 8 519 Cytochrome P450 AT3G14690 58.447 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01801 - K23809 gmx:100808323 862.833