Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01792 ATGGAGGAGTGTTGTGCTTTGTGTGATAGGAAGGCGGTGATGCAGTGTGATTCGGACCAGGCTAAGCTATGCTGGAACTGCGATGAGAGAGTTCACAGTGCGAATTTCTTGGTTGCCAAACACTCCAGGGTTCTATTATGTCGTGTTTGTCTTTCTCTCACTACTTGGAAAGGTTCGGGTCCTAAGCTCACACCCACTGTAGCAGTTTGTCATCGATGTATAGCAGATCGACGTGGCAGGATCCACCATGATGATCATCATCGTGATTATGTAGATGATGATGGTGAATATAGTTCTGATAATGTTTATGACAATGAAAACGATGAAGATGAGGAAGAGGAAGAAGATGAAGAAGTGGAAGAGGATGAGAATCAAGTTGTGCCAATGTCCTCTTCTTCTGCCACGTCACCACCTGGTGATTCTGGTTTATCATCGAAGCGGTTACGAGATAACTCTTTTTCAGTTGATTCTCATGGTGAGACAGGGGTTTCTTCTTCATCTGAGATGGTTTCTGCTGCATTGCATAGTAGTGATGAATCAACCTCTATGAGTGTCTTCAGGCCATTCAAGGAGCATCGAATTAATCAGCGAAATAATTGA 600 0.4367 MEECCALCDRKAVMQCDSDQAKLCWNCDERVHSANFLVAKHSRVLLCRVCLSLTTWKGSGPKLTPTVAVCHRCIADRRGRIHHDDHHRDYVDDDGEYSSDNVYDNENDEDEEEEEDEEVEEDENQVVPMSSSSATSPPGDSGLSSKRLRDNSFSVDSHGETGVSSSSEMVSAALHSSDESTSMSVFRPFKEHRINQRNN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01792 199 MobiDBLite consensus disorder prediction 125 184 - -
Rops3g01792 199 MobiDBLite consensus disorder prediction 96 124 - -
Rops3g01792 199 SMART bboxneu5 1 46 IPR000315 GO:0008270
Rops3g01792 199 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 173 - -
Rops3g01792 199 CDD Bbox1_BBX-like 4 46 - -
Rops3g01792 199 MobiDBLite consensus disorder prediction 85 199 - -
Rops3g01792 199 Coils Coil 103 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01792 Rops-Chr3 30556772 30558058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01792 1 116 C2C2-CO-like Transcription Factor Family AT4G27310 42.623 1.12e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01792 - - gmx:100818267 189.889