Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01787 ATGCATGTGGTGTATGCTAACCGAACAGAAGATGATATATTGTTGAGGGAAGATCTTGATGCATGGGCGAAAGAGTATAAAGATAGGTTCAAGGTGTGGTACATGGTGGAAAACATGAAGGAAGGGTGGGAATACAGTGTGGGGTTCATCACAGAGAGCTCGAAGGATTCCTCAAAGATCACGGTGTGGTTGGGACATCCATTTGTGACTCAATGGAGTCATGGGTTTTGGCAGACCAAGCTGTTTTCGGAAACTATGACTGAGGAAGTTGATGAACTTATTAAACTTTCCCTGTCAAAACCCTTACGTCTTTCTGTTGACCCATCTTCAAGACGACCAACAACCTTGACTGAGGAGGGCTTTGCCTTCACTGTTAATGGGTGGGTGCAATCATATGGATCTCGTTATGTGAAGCCCCCAATCATCTACGGTGATGTGAGCCGCCCAAAGCCAATGACTGTCTTCTGGTCATCCCTTGCCCAAAGCTTCACCAAAGGCCCTATGAAGGGAATGCTTACTGGCCATGATGCAGTAGAAGACCTTGAAAAAGGTGGCATTGGTGTTATCCAAATTGATGAGGCTGCTTTGAGAGAATGGCTACCATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGTTGTCCGTTCCTTCAGGATCACCAATGTTGGTGTCCAGGATTCCACTCAAATCCACACTCACATATGCTACTCTAACTTCAATGACATCATCCACTCAATCATCGATATGGATGCCGATGTTATCACCATTGAGAACTCTCATTCTGATGAGAAGCTCCTCTCAGTCTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTGTACGACATTCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGGATCAACAAGATGCTTGCAGTTCTTGAGAAGAACATCTTGTGGGTCAACCCTGACTGTGGTCTAAAGATTCGTAAGTACAAAGAGGTGAAACCAACCCTCACAAACATGGTTGCTGCAGCAAAACTCATCCTCAACGAGCTTGCTTGTGCGGGCAAGTTGCAAAAGACCAACCTTGGCCGTGGGAGAACTACATGA 1098 0.4617 MHVVYANRTEDDILLREDLDAWAKEYKDRFKVWYMVENMKEGWEYSVGFITESSKDSSKITVWLGHPFVTQWSHGFWQTKLFSETMTEEVDELIKLSLSKPLRLSVDPSSRRPTTLTEEGFAFTVNGWVQSYGSRYVKPPIIYGDVSRPKPMTVFWSSLAQSFTKGPMKGMLTGHDAVEDLEKGGIGVIQIDEAALREWLPLRKSEQAHYLDWVVRSFRITNVGVQDSTQIHTHICYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKIRKYKEVKPTLTNMVAAAKLILNELACAGKLQKTNLGRGRTT* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01787 365 CDD CIMS_C_terminal_like 119 343 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops3g01787 365 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 176 349 - -
Rops3g01787 365 SUPERFAMILY UROD/MetE-like 72 344 IPR038071 -
Rops3g01787 365 Gene3D - 1 63 IPR039261 -
Rops3g01787 365 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 235 341 - -
Rops3g01787 365 Pfam Cobalamin-independent synthase, Catalytic domain 176 342 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops3g01787 365 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 1 53 IPR039261 -
Rops3g01787 365 Pfam Oxidoreductase NAD-binding domain 1 54 IPR001433 GO:0016491
Rops3g01787 365 Gene3D - 64 174 IPR038071 -
Rops3g01787 365 Gene3D - 175 351 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01787 Rops-Chr3 30467598 30469258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01787 1 52 NADPH P450 reductases AT5G17770 40.385 4.85e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01787 K00549 - gmx:100802039 415.231