Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01785 ATGGGAATCTCAGACACCATTATTTCTTATGGAGGGAACTTCGAACTGGGCTTTTTCTCCAGAACCAGAGAAAATTCCACCAAGTACTACATAGGTATATGGTTTAAAAAGGTTCCAAATGACAAGATTGTTTGGGTTGCTAACAGAGATTACGCATTCCAAACTTCTTCAGCCGTTCTTACCATTCAGCATGATGGAAACATTGTCATCACAGATGGGCCAATGAGTTACCGCGTGAACAGCATTCCAAACAACTATAGTACCTATGCCAGGTTGTTAGACTCAGGAAACTTGGTACTGTTGAACAACTCCAACCAAGCAATTTTGTGGCAGAGTTTTGATAGTCCCACGGATACCCTTTTGCCTGGAATGAACATAGGACACGATGAGTTTGGACACACTTGGTCATTGAGATCATGGAAAAATGCAGACGACCCTGCTCCAGGAGCCTTTTCCCTTGAGTATAATTTTGGCATGGCGAGTCTAATAGTCAACAACGGTTCTAATGTGTTCTGGATTGATGGCCGTTCCAATGTTTCTATTCAGGGTGTGATTGACCGAATCGGTATGGCAAGGAACGATAAGGGCTATTTCACTTTGCCAGGTGATAGCAATTCTCGTGTGGTACTTGAAGTGTCAGGGGAGGTTAACCATCAGTATTGGTCAGAGGAAACAAAACGTTGGGTTACTCTACAGTCATCCAAGTGTGGAACCAACAATTCTTGTGGAGCTTTTTCCATTTGTAATCCACAAGCTCTTGACCCTTGTGAATGTCTTACTGGTTTCAAACCATTTGATGCTGATTCTTGGAGGCAGGGGAACAAATCCGCTGGCTGTGTCAGGAAAGAGGAGTTGTCCTGCAGCAACACAAGCAATGACAATAATGATGGATTCTTAAGGTTAGACATGGTGGAATTACCTGCAAACGAACTCATGCTAAAGATGGATACGGCAAGAAGATGTGAAAGGACTTGTTATAGCAATTGTTCTTGTGTTGGTTATGCGTACAATTTTAGCGGTAACTGTCTGTTCTGGTTTGATCAAGTATTGAGTCTGAAGAACATCTCCACTGATGTTGAAGAAGCTAATAATAAACATCCAAGTTTTTTTCTCAGACTACCAGCCTCTGAATTGGTTACCACTGTTTCAAACACAACGAATGCATTTGGTGGGCGAAAAAACAGGATGAGGAATCTACTTCTAATTGTTGTACCGATGTCATTTCTAACCTTGCTTATACCGGGGTTATTTGTTTACTGGACTAGAAGACAAAGGAGGAAAGGAGAAGATTTGCTACATTTTAAAGTGGGCGTGAGCATGAAAGTTAAAGACTCGGAATTTCCTGAAGTTAAAGTGGGCGTGAGCATGAAAGTTAAAGAAGTCAAATTGCCATTATTCAGTTTTGCAAGCGTTTCTGCAGCAACTAACAACTTTTCGGATGCAAATAAACTCGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGAGGATGAAGTTGCTGTAAAAAGGCTATCCCAAAGATCTGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAATCTTGTTCGACTTCTGGGCTGCTGCATTGATCGAAACGAAAAGATGTTGATTTATGAATTTATGCCTAATAAAAGCTTGGATTGCTTTCTTTTTGATGCAACAAAAAGAAGGATGCTAGATTGGGGAACACGAATTCGGATAATTGATGGGATTGCCCAAGCACTCCTTTATCTTCATCAATATTCCAGGTTTCGGATCATTCATCGAGATTTAAAAGCTAGCAACATACTGTTAGACACAAACATGAATCCTAAAATATCAGATTTTGGAATGGCAAGAATATTTGGCGAGAATGAACTTCAAGCAAATACAAATAGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCTTTGGAAGGCCTTTTCTCAATAAAATCTGACGTGTTTAGCTTTGGGGTCCTTCTGTTAGAGATTGTAAGTGGCAAGAAGAACACTGGTTTTTATCAAACAAACTCTCTCAATCTTCTTGGATATGCTTGGGATTTGTGGACAAGCAATTCGGGAATGGACTTGATGGATCCAACATTGAAAGATATCTCTGATAAGCATATGGTATCAAAATATGTGAACATAGGACTTCTCTGTGTTCAAGAAAGTCCAACAGATAGGCCAACCATGTCCGATGTAGTATCAATGATTGGAAATGACACTGCAACCCTTCCTTGTCCCAAGCCACCTGCATTTCTAAATGTTAGAGGTAATGAAAATTCAAGATTGGCTAGAAGAATTGAAGAAGATTTTTCTGTGAATGTTATAACAGAATCACTTGTGGAAGCAAGATGA 2388 0.4024 MGISDTIISYGGNFELGFFSRTRENSTKYYIGIWFKKVPNDKIVWVANRDYAFQTSSAVLTIQHDGNIVITDGPMSYRVNSIPNNYSTYARLLDSGNLVLLNNSNQAILWQSFDSPTDTLLPGMNIGHDEFGHTWSLRSWKNADDPAPGAFSLEYNFGMASLIVNNGSNVFWIDGRSNVSIQGVIDRIGMARNDKGYFTLPGDSNSRVVLEVSGEVNHQYWSEETKRWVTLQSSKCGTNNSCGAFSICNPQALDPCECLTGFKPFDADSWRQGNKSAGCVRKEELSCSNTSNDNNDGFLRLDMVELPANELMLKMDTARRCERTCYSNCSCVGYAYNFSGNCLFWFDQVLSLKNISTDVEEANNKHPSFFLRLPASELVTTVSNTTNAFGGRKNRMRNLLLIVVPMSFLTLLIPGLFVYWTRRQRRKGEDLLHFKVGVSMKVKDSEFPEVKVGVSMKVKEVKLPLFSFASVSAATNNFSDANKLGEGGFGPVYKGKLLNEDEVAVKRLSQRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMPNKSLDCFLFDATKRRMLDWGTRIRIIDGIAQALLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIVSGKKNTGFYQTNSLNLLGYAWDLWTSNSGMDLMDPTLKDISDKHMVSKYVNIGLLCVQESPTDRPTMSDVVSMIGNDTATLPCPKPPAFLNVRGNENSRLARRIEEDFSVNVITESLVEAR* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01785 795 SMART serkin_6 478 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01785 795 SMART blect_4 2 116 IPR001480 -
Rops3g01785 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Rops3g01785 795 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 87 765 - -
Rops3g01785 795 Pfam Protein tyrosine and serine/threonine kinase 482 747 IPR001245 GO:0004672|GO:0006468
Rops3g01785 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Rops3g01785 795 Pfam D-mannose binding lectin 43 141 IPR001480 -
Rops3g01785 795 SMART ntp_6 293 365 IPR003609 -
Rops3g01785 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 554 645 - -
Rops3g01785 795 Gene3D Phosphorylase Kinase; domain 1 453 553 - -
Rops3g01785 795 CDD STKc_IRAK 484 748 - -
Rops3g01785 795 CDD B_lectin 6 116 IPR001480 -
Rops3g01785 795 CDD PAN_AP_plant 285 374 - -
Rops3g01785 795 Pfam S-locus glycoprotein domain 193 264 IPR000858 GO:0048544
Rops3g01785 795 ProSiteProfiles Bulb-type lectin domain profile. 1 113 IPR001480 -
Rops3g01785 795 SUPERFAMILY Protein kinase-like (PK-like) 463 767 IPR011009 -
Rops3g01785 795 FunFam Uncharacterized protein 454 553 - -
Rops3g01785 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 146 IPR036426 -
Rops3g01785 795 ProSiteProfiles Protein kinase domain profile. 478 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01785 795 FunFam Uncharacterized protein 647 757 - -
Rops3g01785 795 Pfam Domain of unknown function (DUF3403) 750 795 IPR021820 GO:0004674
Rops3g01785 795 Pfam PAN-like domain 292 351 IPR003609 -
Rops3g01785 795 Gene3D - 1 114 IPR036426 -
Rops3g01785 795 Gene3D Transferase(Phosphotransferase) domain 1 554 754 - -
Rops3g01785 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 113 - -
Rops3g01785 795 ProSiteProfiles PAN/Apple domain profile. 287 364 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01785 Rops-Chr3 30400293 30403734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01785 393 776 Receptor kinase-like Gene Family AT4G05200 50.386 2.73e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01785 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01785 - - gmx:100811148 1148.65