Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01781 ATGAGTCAATTCTCTCAAGAGGGACAACAAGACCTTTATATACGAGTTCCTGCTTCAAAGCTAGGTTCAAACACAACAAATGAAACAAAACCAACAAATACATTTGATAAGGGTGTAAAAGTTAAGAAGGATGATGTTAAATTGCCATTATTCAGTTTTGTGAGCGTTTCTGCGGCAACTAAAAACTTTTCGGATACAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCTGTCAAAAGGTTATCCCAAAGATTTGGTCAAGGATTGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAACAATCTTGTTAGACTTTTAGGTTGCTGCATTGATCGAAAGGAAAAAATGCTGATTTACGAATTTATGCCTGATAAAAGCTTGGATTATTTTCTTGTTGATGCAACAAAAAGAAGGATGCTAGATTGGAGAAAACGATTTCGGATAATTGATGGGATTGCCCAAGGACTCCTTTATCTTCATCAATATTCCAGGTTCCGAATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACATCAATATGAATCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGCGAGAATAAACTTCAAGCAAATACAAATCAGATAGTTGGAACTCATGGCTACATATCCCCTGAATATGCTCTGAATGGCCTCTACTCAATAAAATCTGATGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTGTAAGTGGCAAGAAGAATACAGGATTTTATCAAACAAATTTCTTCCATCTTCTAGGATATGCTTGGGATCTATGGACAAGCAACTTGGGAATGGAGCTGATGGATCCAGCACTGGAAGATATCTCCAATAAGCACGTGGTACCAAGGTATGTGAACATAGGACTTCTGTGTGTTCAAGATAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCGGCTCTTCCTCTTCCTAAGCCACCTGCATTTCTATATGTGAGAGGTAATGAAAATTCAAGACAAGCCAGAAGCATGGAAGAAAAATTTTCTGTAAATGTTATTACAGATTCACTTGTGGAAGCAAGATGA 1143 0.378 MSQFSQEGQQDLYIRVPASKLGSNTTNETKPTNTFDKGVKVKKDDVKLPLFSFVSVSAATKNFSDTNKLGEGGFGPVYKGKLLNGDEVAVKRLSQRFGQGLEELRNEALLIAKLQHNNLVRLLGCCIDRKEKMLIYEFMPDKSLDYFLVDATKRRMLDWRKRFRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARIFGENKLQANTNQIVGTHGYISPEYALNGLYSIKSDVFSFGVLLLEIVSGKKNTGFYQTNFFHLLGYAWDLWTSNLGMELMDPALEDISNKHVVPRYVNIGLLCVQDSPADRPTMSDVVSMIGNDTAALPLPKPPAFLYVRGNENSRQARSMEEKFSVNVITDSLVEAR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01781 380 FunFam Uncharacterized protein 39 138 - -
Rops3g01781 380 Pfam Domain of unknown function (DUF3403) 335 380 IPR021820 GO:0004674
Rops3g01781 380 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01781 380 Gene3D Transferase(Phosphotransferase) domain 1 139 339 - -
Rops3g01781 380 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Rops3g01781 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Rops3g01781 380 SMART serkin_6 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01781 380 SUPERFAMILY Protein kinase-like (PK-like) 47 359 IPR011009 -
Rops3g01781 380 Pfam Protein tyrosine and serine/threonine kinase 66 332 IPR001245 GO:0004672|GO:0006468
Rops3g01781 380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 356 - -
Rops3g01781 380 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 139 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01781 Rops-Chr3 30307876 30311915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01781 51 362 Receptor kinase-like Gene Family AT4G05200 56.869 4.14e-127 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01781 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01781 - - gmx:100811148 570.852