Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01781 | ATGAGTCAATTCTCTCAAGAGGGACAACAAGACCTTTATATACGAGTTCCTGCTTCAAAGCTAGGTTCAAACACAACAAATGAAACAAAACCAACAAATACATTTGATAAGGGTGTAAAAGTTAAGAAGGATGATGTTAAATTGCCATTATTCAGTTTTGTGAGCGTTTCTGCGGCAACTAAAAACTTTTCGGATACAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCTGTCAAAAGGTTATCCCAAAGATTTGGTCAAGGATTGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAACAATCTTGTTAGACTTTTAGGTTGCTGCATTGATCGAAAGGAAAAAATGCTGATTTACGAATTTATGCCTGATAAAAGCTTGGATTATTTTCTTGTTGATGCAACAAAAAGAAGGATGCTAGATTGGAGAAAACGATTTCGGATAATTGATGGGATTGCCCAAGGACTCCTTTATCTTCATCAATATTCCAGGTTCCGAATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACATCAATATGAATCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGCGAGAATAAACTTCAAGCAAATACAAATCAGATAGTTGGAACTCATGGCTACATATCCCCTGAATATGCTCTGAATGGCCTCTACTCAATAAAATCTGATGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTGTAAGTGGCAAGAAGAATACAGGATTTTATCAAACAAATTTCTTCCATCTTCTAGGATATGCTTGGGATCTATGGACAAGCAACTTGGGAATGGAGCTGATGGATCCAGCACTGGAAGATATCTCCAATAAGCACGTGGTACCAAGGTATGTGAACATAGGACTTCTGTGTGTTCAAGATAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCGGCTCTTCCTCTTCCTAAGCCACCTGCATTTCTATATGTGAGAGGTAATGAAAATTCAAGACAAGCCAGAAGCATGGAAGAAAAATTTTCTGTAAATGTTATTACAGATTCACTTGTGGAAGCAAGATGA | 1143 | 0.378 | MSQFSQEGQQDLYIRVPASKLGSNTTNETKPTNTFDKGVKVKKDDVKLPLFSFVSVSAATKNFSDTNKLGEGGFGPVYKGKLLNGDEVAVKRLSQRFGQGLEELRNEALLIAKLQHNNLVRLLGCCIDRKEKMLIYEFMPDKSLDYFLVDATKRRMLDWRKRFRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARIFGENKLQANTNQIVGTHGYISPEYALNGLYSIKSDVFSFGVLLLEIVSGKKNTGFYQTNFFHLLGYAWDLWTSNLGMELMDPALEDISNKHVVPRYVNIGLLCVQDSPADRPTMSDVVSMIGNDTAALPLPKPPAFLYVRGNENSRQARSMEEKFSVNVITDSLVEAR* | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01781 | 380 | FunFam | Uncharacterized protein | 39 | 138 | - | - | |
Rops3g01781 | 380 | Pfam | Domain of unknown function (DUF3403) | 335 | 380 | IPR021820 | GO:0004674 | |
Rops3g01781 | 380 | ProSiteProfiles | Protein kinase domain profile. | 63 | 340 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g01781 | 380 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 339 | - | - | |
Rops3g01781 | 380 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 138 | - | - | |
Rops3g01781 | 380 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g01781 | 380 | SMART | serkin_6 | 63 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g01781 | 380 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 359 | IPR011009 | - | |
Rops3g01781 | 380 | Pfam | Protein tyrosine and serine/threonine kinase | 66 | 332 | IPR001245 | GO:0004672|GO:0006468 | |
Rops3g01781 | 380 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 42 | 356 | - | - | |
Rops3g01781 | 380 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 139 | 341 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01781 | Rops-Chr3 | 30307876 | 30311915 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01781 | 51 | 362 | Receptor kinase-like Gene Family | AT4G05200 | 56.869 | 4.14e-127 | 379 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops3g01781 | PK_Tyr_Ser-Thr | 1.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01781 | - | - | gmx:100811148 | 570.852 |