Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01777 ATGAAATCAGATATCTTTAGTTATGGTGTGATAATTCTAGAGATCGTAAGTGGCAAGAAGAACATAGAATTTTCAGACCCAGAACACTGCCTTAATCTTCTTGGACATGCGTGGAGATTATGGACTGAAGAGAAGGCATTGGAGTTGCTGGATGGAATGTTAAGGGAAAGATTCAAACTTGCTGAACTCTTACAATGCATACAAGTAGGCCTCTTATGCGTGCAACAAAGAGCAGAAGATAGGCCAGACATGTCATCCGTGGTTCTAATGTTGAATGGTGAGACATTATTGCCCAACCCAAAGGTTCCTGGTTTTTACACAGACCGAGATGTTACACCTAAAGCAAATTCATTGCCTGCAAATAGCGAACTATTCGCATCCAATGAAATGTCCATCACATTAGAAGCAAGATAG 414 0.4058 MKSDIFSYGVIILEIVSGKKNIEFSDPEHCLNLLGHAWRLWTEEKALELLDGMLRERFKLAELLQCIQVGLLCVQQRAEDRPDMSSVVLMLNGETLLPNPKVPGFYTDRDVTPKANSLPANSELFASNEMSITLEAR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01777 137 SUPERFAMILY Protein kinase-like (PK-like) 2 108 IPR011009 -
Rops3g01777 137 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Rops3g01777 137 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01777 Rops-Chr3 30257910 30258399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01777 1 121 Receptor kinase-like Gene Family AT4G23140 43.511 7.14e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01777 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01777 - - gmx:100790261 208.379