Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01771 ATGAATAATGTTAGAATGTTACCAATATGCTCTCTTTTATTTTTCTTCATAAGAACCACCACTTCACTAAACAGTATTGTTCCAGGTCAATCCATCCGATATAATCAGACACTAGTTTCAGCCTCTGCAGCTTTTGAACTGGGGTTTTTCAGCCTTGAAGCTTCTAATAGTCTATACGTTGGAATATGGTACAAGGATTCTCCTTCAACAGTGGTATGGGTGGCCAACAGGGAAGCACCACTCAAACATACCTCTGGAGTCTTACAAATCAATGATCAAGGGATTCTTGTCCTTCTTAATAGCACAAAGAGCATTGTCTGGTCGTCCAATATATCAAGCAAAGCAGAGAATCCTATTGCACAGCTCTTGGACTCCGGAAATTTTGTTGTGAGAAATGGACATGACAATAACCTGAGCAATCTTTTATGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGAAACTGGTCTAGACAAGTTTGTGTCATCTTGGAAAAATACAGATGATCCTGGTAAGGGTGATTACATAGTTAAAATAGACCTTCGAGGCTATCCACAAGCAGTTCAACTGAAAGGAAATGTTATAAAGGCTAGATCAGGACACTGGAATGGCCTTACTTTTACAGGATATCCACCTCAAAAGCATAATACAATATATAAAGAAGAATTTGTGTTCAACGAGAAAGAAGTGTATTATCTGTATGAACTTCTGAATAGTTCAATTTTCTCCAGGTATGTCCTCCCCACTTCAGGAATTGGCCAACGTTTAGTCTGGACAAGTCAAACAAGCAGCTGGGATGTAATCTCTATAGCCCTAGCAGATCAGTGTACAAGTTATGCTGTGTGTGGTGCATATTCAATCTGCAACATTAGTAACACTCCTGTCTGTGCATGCCTGAAAGGATTTGTACCCAAACATCCAGAAGAATGGAATGTGTCATATTGGTTTAATGGCTGCATTCGCGGCACTCCATTGAATTGTAATAACAATGATGACTTCATGAAGTACACAGGTTTGAAGTTACCAGACACTTCATCTTCGTGGTATAACAAGACCATGGACCTTATGGAATGCCGAAAATATTGTCTGCAAAACTGTTCCTGTACAGCATATGCAAATTTGGACATACGAGGTAGAGGAAGTGGCTGCTTACTTTGGTTTTATGATCTGATTGACATGAGTCAATTCTCTCAAGGGGGACAAGACCTATATATACGAGTTCCTGCTTCAGATCTAGAAGGTTCAAACACAACAAATGAAACAGAACCAACAAATGCAATTGGTGGGCATGAAAACAAGCAGAGGGATCTATTTCTAATTGTTGTACCGATCTCATTTCTAACATTGCTTATACTTGTGGGCCTATTCATTTACTGGAAAGGAAGGCAAAGGAGGAAAGGGGAAGATTTGCTACATTTTGAAGTAGGCAATAAAGACTTGAAGTTTACTGAAGCAGATAAGGGTGCAAAAGTTAAGAAGAAGGATATCAAATTGCCATTATTCAGTTTTGTAAGCGTTTCAGCAGCAACTAATAACTTCTCGGATGCAAATAAACTCGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGAAGAGGTTGCTGTAAAAAGACTATCCCGAAGATCTGGTCAAGGATGGGAAGAATTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAATCTTGTTCGACTTTTGGGCTGCTGCATTGATAGAAATGAAAAGATGCTTATTTATGAATTTATGCCCAATAAAAGCTTGGATTGTTTTCTTTTTGATGCAACAAAAGGAGGGATGCTAGATTGGGGAACACGAGTTCGGATAATTGATGGGATTGCCCAAGGACTCCTTTATCTTCATCAATATTCTAGGTTCCGGATCATTCATCGAGATCTAAAAGCTAGCAACGTATTGTTAGACATCAACATGAATCCTAAAATATCAGATTTTGGATTGGCCAGAATATTTGGTGAGAATGAACATCAAGCAAATACAAATCGGATAGTTGGAACTTATGGCTACATGTCTCCTGAATATGCTCTGGATGGCCTTTACTCAATAAAATCTGACGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTATAAGTGGAAAGAAGAACACAGGCTTTTATCAAACAAATTCCCTTAGTCTTCTTGGATATGCTTGGGATCTATGGACAAGCAATTCGGGAATGGACCTGATGGATCCAGCACTGGAAGATATCTCCAATAAGAATGTGGTGCCAAGGTATGTGAACATAGGACTTCTTTGTGTTCAAGAGAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATAATTGGCAATGACACTGCAGTCCTTCCTTGTCCTAAGCCACCTGCATTTCTAAATGTGAGAGGTCATGAAAATTCAAGATTTGCCAGAAACATGGTAGAAAACTTCTCTGTGAATGCTATCACAGATTCACTTGTGGAAGCAAGATGA 2523 0.3924 MNNVRMLPICSLLFFFIRTTTSLNSIVPGQSIRYNQTLVSASAAFELGFFSLEASNSLYVGIWYKDSPSTVVWVANREAPLKHTSGVLQINDQGILVLLNSTKSIVWSSNISSKAENPIAQLLDSGNFVVRNGHDNNLSNLLWQSFDYPCDTLLPGMKLGWNLETGLDKFVSSWKNTDDPGKGDYIVKIDLRGYPQAVQLKGNVIKARSGHWNGLTFTGYPPQKHNTIYKEEFVFNEKEVYYLYELLNSSIFSRYVLPTSGIGQRLVWTSQTSSWDVISIALADQCTSYAVCGAYSICNISNTPVCACLKGFVPKHPEEWNVSYWFNGCIRGTPLNCNNNDDFMKYTGLKLPDTSSSWYNKTMDLMECRKYCLQNCSCTAYANLDIRGRGSGCLLWFYDLIDMSQFSQGGQDLYIRVPASDLEGSNTTNETEPTNAIGGHENKQRDLFLIVVPISFLTLLILVGLFIYWKGRQRRKGEDLLHFEVGNKDLKFTEADKGAKVKKKDIKLPLFSFVSVSAATNNFSDANKLGEGGFGPVYKGKLLNGEEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMPNKSLDCFLFDATKGGMLDWGTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNVLLDINMNPKISDFGLARIFGENEHQANTNRIVGTYGYMSPEYALDGLYSIKSDVFSFGVLLLEIISGKKNTGFYQTNSLSLLGYAWDLWTSNSGMDLMDPALEDISNKNVVPRYVNIGLLCVQESPADRPTMSDVVSIIGNDTAVLPCPKPPAFLNVRGHENSRFARNMVENFSVNAITDSLVEAR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01771 840 SUPERFAMILY Protein kinase-like (PK-like) 507 809 IPR011009 -
Rops3g01771 840 Gene3D Transferase(Phosphotransferase) domain 1 599 798 - -
Rops3g01771 840 CDD STKc_IRAK 529 793 - -
Rops3g01771 840 CDD B_lectin 35 149 IPR001480 -
Rops3g01771 840 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Rops3g01771 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Rops3g01771 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Rops3g01771 840 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Rops3g01771 840 Gene3D Phosphorylase Kinase; domain 1 497 598 - -
Rops3g01771 840 FunFam Uncharacterized protein 499 598 - -
Rops3g01771 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Rops3g01771 840 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Rops3g01771 840 Gene3D - 19 146 IPR036426 -
Rops3g01771 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 801 - -
Rops3g01771 840 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01771 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 784 - -
Rops3g01771 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Rops3g01771 840 Pfam PAN-like domain 337 403 IPR003609 -
Rops3g01771 840 SMART serkin_6 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01771 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Rops3g01771 840 SMART blect_4 29 149 IPR001480 -
Rops3g01771 840 CDD PAN_AP_plant 333 418 - -
Rops3g01771 840 Pfam D-mannose binding lectin 70 175 IPR001480 -
Rops3g01771 840 Pfam Protein tyrosine and serine/threonine kinase 527 791 IPR001245 GO:0004672|GO:0006468
Rops3g01771 840 SMART ntp_6 338 417 IPR003609 -
Rops3g01771 840 Gene3D Hepatocyte Growth Factor 334 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01771 Rops-Chr3 30097354 30101220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01771 450 809 Receptor kinase-like Gene Family AT4G23190 53.678 1.77e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01771 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01771 - - cave:132173742 923.694