Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01762 ATGATTCTGGCCTTGGCGAGTCTAATAGTCTACAAGGGTTCTGATATGTTCTGGATTGATTTCAGTGCCCATGTTTCCAATCAGGATGTTATTAACCGCTTGGATGTGATACATGACAACATGGGCTATTTAACTTTACCAGGTGATAGCAATTCTCGTGTGGTGCTGGAAGTGTCAGGGGAGCTTAGCCATCAGCATTGGTCAGAGGAAACAAAACATTGGGTTTCTCCAGAGTCGTCCAAGTGCGGAACCAACGATTCGTGTGGAGTTTTTTCCATTTGTAATCCGCGAGCTCTTCACCCTTGTCACTGTCTTCCTGGTTTCAAACCGTCTGACGCTGATTCTTGGAGGCAGGGGATCACATCCGCTGGCTGTGTCAGGAAAACGGAGTTGTCTTGCAGCAACAAAAATGGTAACAGTAATGATGGATTCTTAAACATTGGTAAGGTGGAATTGCCTCCTAATCAAATCGGCATGTCTGAGACAGTTACGGTGAGAGAATGTGAAAGGAGTTGCTCCAGCACTTGTTCTTGCATTGGTTATGCTTATGATTTTAATGCTGACTGTCTGTTATGGGTTGATCTACTACTGAGTCTGAAGAACATCTCAACTGATGTTGAAAATGATAATAACAGTCATCCAAATTTTTATCTCAGACTTGCTGCTTCTGAATTTGTTACCAAACGTTCAAACATAACGAATGGAACAGAAACAAAGAATGCATTTGGTGAGCATGAAAACAAGCTGAGGGATCTACTTATAATTCTTGTACCAATCTCGTTTTTAACATTGCTTATAGTGCTGGGCCTATTCGTTTACTGGATCAGAAGGCAAAGGAGGAAAGGGGAAGATTTGCTACATTTTGAAGTAGGCAGGAGCATGAAAATTAAAGACTCGGAGTTTACTGAAGCAGATAAGGGTGCAAAAGTTAAGAAGAAGGATGTCAAATTGCCATTATTCAGTTTTCTAGATGCATGCTTAGATATGATGAACCGTCTTTGGGACATGGTCTATCATTTTGACTTTGGTCAGCCTATGACATGGGATGCATTGCCTCCACCTCCACCTCCTCCAGAGCAACCTGAGTCACCTCCGCCTTACTTATATCCGGGCACTCTTTCTCCCCTTGGCTACATGTCCCTTGAATATGCCACGGAGGGCCTTTACTCAAGAAAATCTGATGTGTTTTGTTTTGGGGTCCTTTTGTTAGAAATTGTAAGTGGCAAGAAGAATACAGACTTTTATCAAACAAATTTCGTCAAGCTTCTTGGATATGCTTGGGATCTGTGGACAAGCAATTTAGGAATGGACCTGATGGATCCATCACTAGAAGATATCTCCAATAAGCATGTGGTGCTAAAATATGTGAACATTGGACTTCTATGTGTTCAAGAAAGTCCAACAGATAAGCCAACCATTTCTAATGTTGTATCAATGATTGGTAATGACAGTTCTATCCTTCCTTGTCCTAAGCCACCTGCATTTCTAAATGTGAGAGGTAATGAAAATTCAAGATTGGCAAGACGTGTGGAAGAAAACGTTTCTGTGAATTTTATCACAGATTCACTTGTGGAAGCAAGATGA 1584 0.4141 MILALASLIVYKGSDMFWIDFSAHVSNQDVINRLDVIHDNMGYLTLPGDSNSRVVLEVSGELSHQHWSEETKHWVSPESSKCGTNDSCGVFSICNPRALHPCHCLPGFKPSDADSWRQGITSAGCVRKTELSCSNKNGNSNDGFLNIGKVELPPNQIGMSETVTVRECERSCSSTCSCIGYAYDFNADCLLWVDLLLSLKNISTDVENDNNSHPNFYLRLAASEFVTKRSNITNGTETKNAFGEHENKLRDLLIILVPISFLTLLIVLGLFVYWIRRQRRKGEDLLHFEVGRSMKIKDSEFTEADKGAKVKKKDVKLPLFSFLDACLDMMNRLWDMVYHFDFGQPMTWDALPPPPPPPEQPESPPPYLYPGTLSPLGYMSLEYATEGLYSRKSDVFCFGVLLLEIVSGKKNTDFYQTNFVKLLGYAWDLWTSNLGMDLMDPSLEDISNKHVVLKYVNIGLLCVQESPTDKPTISNVVSMIGNDSSILPCPKPPAFLNVRGNENSRLARRVEENVSVNFITDSLVEAR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01762 527 ProSiteProfiles PAN/Apple domain profile. 133 221 IPR003609 -
Rops3g01762 527 Gene3D Transferase(Phosphotransferase) domain 1 359 486 - -
Rops3g01762 527 SUPERFAMILY Protein kinase-like (PK-like) 371 497 IPR011009 -
Rops3g01762 527 Pfam PAN-like domain 138 198 IPR003609 -
Rops3g01762 527 CDD TM_EGFR-like 259 281 - -
Rops3g01762 527 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 372 467 - -
Rops3g01762 527 Pfam S-locus glycoprotein domain 41 111 IPR000858 GO:0048544
Rops3g01762 527 Pfam Protein tyrosine and serine/threonine kinase 373 423 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01762 Rops-Chr3 29974818 29975963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01762 373 496 Receptor kinase-like Gene Family AT4G23250 46.825 2.53e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01762 PK_Tyr_Ser-Thr 8.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01762 - - mtr:11407439 335.109