Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01759 ATGAATTATTTTAGAATGTTACCAATCTGCTGTCTTTTATTTATCTTCGTGAGAACCACCACTTCACTAGACAGTATTGTTCCAGGTCAATCCATCCTATATCATGAGACATTAGTTTCAGCCTCTACTGTTTTTGAACTTGGGTTTTTCAGACCTGGAACTTCTAATAGTCTATATGTTGGAATATGGTACAAGGATTCTCCTTCAACAAAGGTATGGGTGGCCAACAGGGAAGCACCACTCAACAACACCTCTGGAGTCTTACAAATCAATGATCAAGGAGTTCTTGTTCTTCTTAGTGACACAGAGAGCATTGCCTGGTCATCCAATATCTCAGGCAAAGCAGAGAACCCAATTGCACAGCTCTTGGACTCCGGGAATCTTGTTGTTAGAAATGGACATGACAACAACCAGGGCCATCTATTGTGGCAGAGTTTTGATTATCCAAGTGATACATTATTGCCAGGAATGAAGTTTGGATGGAACTTAGAAACAGGACTAGAAAGGTTTCTGTCATCTTGGAAAAGTGCAAATGATCCTGGCATTGGGCAGACTTTATTCTGGACAAGTCAAACAAGCAGCTGGGATGTAATCTCGACAGACCTAGCAGATCAGTGTGTAAATTATGCTATGTGTGGTGCATATTCAATCTGCAATGTTAGTAACAATGATCCTGTCTGTGCATGCCTGAAAGGATTTGTACCCAAACATCCAAAAGAATGGAATATGTCACATTGGTCTAACGGCTGCATTCGCAGCATTCCACTGGATTGTAATAACAACGATGGCTTCGTGAAGTACACGGGTTTGAAGTTACCAGACACTTCATCTTCATGGTATAACAAGACCATGGACCTTATGGAATGCAAGAAATCTTGTCTGCATAACTGTTCCTGTTCAGCATATGCAAATTTTGATGTGGGAGGTGGAGGAAGTGGCTGCGTACTTTGGTTTGATGATCTGATTGACATGAGTCAATACTCTCAAAGGGAACAGGGCTTTTATGGGGGACAGGACCTTTATGTACGAGTTCCTGCTTCAGAGCTAGGGATTGGAGGCATGACAAGAGAAAAGTTTCCACATTACAGTTCAAACATAACGAATGAAACAGAACCCGGGAATGCATTTGGTGGGCATGAAAACAAGCAGAGGGATCTACTTCTAATTGTTCTACCGATCTCATTTCTAACATTGCTTATCTTGGTGGGCCTATTCGTTTACTGGATTAGAAGGCAAAGGGGGAAAGGGGAAGATTTGTTACTTTTTGAAGTAGGCATGAGTATGAAAGTTAAAGACTCGGAGTTTACTGAAGCAGAAAAGGGTGCAAAGGTTAAGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTTGCAAGTGTTTCGGCAGCAACTAATAAATTTTCAGATGCAAATAAACTTGGTGAAGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCCGTAAAGAGGCTATCCCAAAGATCTAGTCAAGGATGGGTGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAATCTTGTTCGACTTCTGGGCTGTTGCATTGATCAAAATGAAAAGATGCTGATATATGAATTTATGCCTAATAAAAGCTTGGATTGCTTTCTTTTTGATACAACAAAAAGAAGGATGCTAGATTGGGGAACGCGAGTTCGGATAATTGATGGGATTGCCCAAGGACTCCTTTATCTTCATCAATATTCCAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTATTAGACATCAACATGAATCCTAAAGTATCAGATTTTGGAATGGCAAGAATATTTGGCGACAATGAACTTCAAGCAAATACAAATCGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCTCTGAATGGCCTATACTCAATTAAATCTGATGTGTTTAGTTTTGGGGTCCTTTTGTTAGAGATTGTAAGTGGCAAGAAGAATACAGATTTTTATCAAACAAATTTCCTCCATCTTCTTGGATATGCTTGGGATCTATGGACAAGCAATTTGGTAATGGACCTGAGGGATCCAGCACTGGAAGATATCTCCAATAAGCACGTGGTAACAAGATATGTGAACATAGGACTTCTCTGTGTTCAAGAAAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCAACCCTTCCTCCTCCTAAGGCACCTGCATTTCTAATTGTGAGAGGTAAAGAAAATTCAAGACTAGCCAGAAGAATGGAAGAAAACTTTTCTGTTAATGTTCTTACAGATTCACTGGTGGAAGCAAGATGA 2352 0.4026 MNYFRMLPICCLLFIFVRTTTSLDSIVPGQSILYHETLVSASTVFELGFFRPGTSNSLYVGIWYKDSPSTKVWVANREAPLNNTSGVLQINDQGVLVLLSDTESIAWSSNISGKAENPIAQLLDSGNLVVRNGHDNNQGHLLWQSFDYPSDTLLPGMKFGWNLETGLERFLSSWKSANDPGIGQTLFWTSQTSSWDVISTDLADQCVNYAMCGAYSICNVSNNDPVCACLKGFVPKHPKEWNMSHWSNGCIRSIPLDCNNNDGFVKYTGLKLPDTSSSWYNKTMDLMECKKSCLHNCSCSAYANFDVGGGGSGCVLWFDDLIDMSQYSQREQGFYGGQDLYVRVPASELGIGGMTREKFPHYSSNITNETEPGNAFGGHENKQRDLLLIVLPISFLTLLILVGLFVYWIRRQRGKGEDLLLFEVGMSMKVKDSEFTEAEKGAKVKKKEVKLPLFSFASVSAATNKFSDANKLGEGGFGPVYKGKLLNGDEVAVKRLSQRSSQGWVELRNEALLIAKLQHNNLVRLLGCCIDQNEKMLIYEFMPNKSLDCFLFDTTKRRMLDWGTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKVSDFGMARIFGDNELQANTNRIVGTYGYMSPEYALNGLYSIKSDVFSFGVLLLEIVSGKKNTDFYQTNFLHLLGYAWDLWTSNLVMDLRDPALEDISNKHVVTRYVNIGLLCVQESPADRPTMSDVVSMIGNDTATLPPPKAPAFLIVRGKENSRLARRMEENFSVNVLTDSLVEAR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01759 783 Gene3D - 18 146 IPR036426 -
Rops3g01759 783 Pfam PAN-like domain 258 324 IPR003609 -
Rops3g01759 783 CDD STKc_IRAK 472 736 - -
Rops3g01759 783 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 182 727 - -
Rops3g01759 783 FunFam Uncharacterized protein 442 541 - -
Rops3g01759 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 744 - -
Rops3g01759 783 Gene3D Transferase(Phosphotransferase) domain 1 542 742 - -
Rops3g01759 783 CDD B_lectin 36 149 IPR001480 -
Rops3g01759 783 SMART serkin_6 466 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01759 783 CDD PAN_AP_plant 255 345 - -
Rops3g01759 783 Gene3D Hepatocyte Growth Factor 255 335 - -
Rops3g01759 783 SUPERFAMILY Protein kinase-like (PK-like) 450 755 IPR011009 -
Rops3g01759 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Rops3g01759 783 Pfam Protein tyrosine and serine/threonine kinase 470 735 IPR001245 GO:0004672|GO:0006468
Rops3g01759 783 ProSiteProfiles Protein kinase domain profile. 466 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01759 783 Pfam Domain of unknown function (DUF3403) 738 783 IPR021820 GO:0004674
Rops3g01759 783 Gene3D Phosphorylase Kinase; domain 1 426 541 - -
Rops3g01759 783 SMART ntp_6 259 344 IPR003609 -
Rops3g01759 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 257 344 - -
Rops3g01759 783 Pfam D-mannose binding lectin 70 175 IPR001480 -
Rops3g01759 783 Pfam S-locus glycoprotein domain 181 236 IPR000858 GO:0048544
Rops3g01759 783 SMART blect_4 29 149 IPR001480 -
Rops3g01759 783 ProSiteProfiles PAN/Apple domain profile. 258 340 IPR003609 -
Rops3g01759 783 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Rops3g01759 783 PIRSF SRK 181 783 IPR024171 GO:0004674
Rops3g01759 783 PIRSF SRK 1 187 IPR024171 GO:0004674
Rops3g01759 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Rops3g01759 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01759 Rops-Chr3 29826998 29831068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01759 454 764 Receptor kinase-like Gene Family AT4G05200 58.974 9.52e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01759 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01759 - - gmx:100811148 805.438