Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01758 ATGAATAATGTTCGAATGTTAGCAATCTGCTCTCTTTTATTTATCTTCATGAGAACCAACACTTCATTAGACACTATTGTTCCAGGTCAATCCATCCGATATAAACAGACATTAGTTTCAGCCTCTGCAGCCTTTGAACTTGGGTTTCTCAGCCGTGGAGCTGCTAATAGTCTATATGTTGGAATATGGTACAAGGATTCTCGTTCAACAGTGGTATGGGTGGCCAACAGGGAAGCACCACTCAAAAATACCTCTGGAGTTTTACTAATCAATGATCAAGGGATTCTTGTCCTTCTTAATGGCACAAAGAGTATTGTCTGGTCGTCCAATATATCAAGCAAAGCAGAGAATCCTATTGCACAGCTCTTGGACTCCGGAAATTTTGTTGTGAGAAATGGACATGACAATAACCTGAGCAATCTATTATGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGAAACTGGCCTAGACAGGTTTCTATCATCTTGGAAAAGTACAGATGATCCTGGTAAGGGTGATTACATAGATAAAATAGAGCTTCAAGGCTATCCACAAGCAGTTGAACTAAAAGGAAAAGTTAAAAAGGCTAGAGCAGGACATTGGAATGGCCTTACTTTTTCAGGATATCCACCTCAAAAGCCTACTCCAATATATAGAGAAGAATTTGTGTTCAATGAGAAAGAAGTATATTATCGGTATGAACTTTTGAGTAGATCAGTTTTCTCAAGATATGTCCTCTCCACTGAAGGCATTGGGCAAATATTAGTCTGGACAAGTCAAACAAGTAGCTGGCAGGTAGTTTCAATCACCCAACCAGATCAATGTGTAGATTATGCTTTGTGTGGAGCATATTCAATCTGCATCTATAGTAACAATGCTCCCGTCTGTGCATGCCTGAAAGGATTTGTACCCAAATATCCAGAAGAATGGAAGGTGTCAAAGTGGTCTAATGGTTACATTCGCAATAGTCCATTGGATTGTAATAATGATGATGGCTTCATGAAGTACACGAGTCTGAAGTTACCGGACACATCCTCTTCATGGTATAGCAAGACCATGGACCTTATGGAATGCAAGAAATCTTGTCTGCAAAACTGTTCCTGTACAGCATATGCTAATTTGAATATACGAGGCTCAAACATAACAAATGAAACAAAACCAACAAATGCAAAAGGTGGGCATGAAAACAAGCAGAGGGATCTACTTCTAATTGTTGTACCGATCTCATTTCTAACATTGCTTATAGTTGTGGGCCTATTCATTTACCCGAAAGGAAGGCAAAGGAGGAAAGGGGAAGATTTGCTACATTTTGAAGTAGGCAAGAGCATGAAAGTTAAAGACTCGGAGTTTATTGAAGCAGATAAGGGTGCAAAAGTTAAGAAGGATGTCAAATTGCCATTATTCAGTTTTGTGAGCGTTTCAGCAGCAACCAATAACTTTTTGGATGCAAATAAACTCGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTTTTGAATGGGGATGAGGTTGCTGTAAAAAGGTTATCCCGAAGATCTGGTCAAGGATGGGAAGAGTTGAGAAATGAAGCCTTGTTGATTGGAAAACTCCAACACAACAATCTTGTTCGACTTCTAGATGGCCTTTACTCAATAAAATCTGACGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTATAAATGGCAAGAAGAACACAGGCTTTTATGAAACAAATTCCCTCAGTCTTCTTGGATATGCTTGGGATCTATGGACAAGCAATTCGAGAATGGACCTGATGGATCCAGCACTGGATGATATCTCCAATAAGCACATGGTACCAAGGTATGTGAACATAGGACTTCTTTGTGTTCAAGAGAGACCACCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGAAAATTCAAGATTAGCCAGAAACATGGAAGAAAACTTCTCTGTGAATGCTATCACAGATTCACTTGTGGAAGCAAGATGA 2025 0.3956 MNNVRMLAICSLLFIFMRTNTSLDTIVPGQSIRYKQTLVSASAAFELGFLSRGAANSLYVGIWYKDSRSTVVWVANREAPLKNTSGVLLINDQGILVLLNGTKSIVWSSNISSKAENPIAQLLDSGNFVVRNGHDNNLSNLLWQSFDYPCDTLLPGMKLGWNLETGLDRFLSSWKSTDDPGKGDYIDKIELQGYPQAVELKGKVKKARAGHWNGLTFSGYPPQKPTPIYREEFVFNEKEVYYRYELLSRSVFSRYVLSTEGIGQILVWTSQTSSWQVVSITQPDQCVDYALCGAYSICIYSNNAPVCACLKGFVPKYPEEWKVSKWSNGYIRNSPLDCNNDDGFMKYTSLKLPDTSSSWYSKTMDLMECKKSCLQNCSCTAYANLNIRGSNITNETKPTNAKGGHENKQRDLLLIVVPISFLTLLIVVGLFIYPKGRQRRKGEDLLHFEVGKSMKVKDSEFIEADKGAKVKKDVKLPLFSFVSVSAATNNFLDANKLGEGGFGPVYKGKFLNGDEVAVKRLSRRSGQGWEELRNEALLIGKLQHNNLVRLLDGLYSIKSDVFSFGVLLLEIINGKKNTGFYETNSLSLLGYAWDLWTSNSRMDLMDPALDDISNKHMVPRYVNIGLLCVQERPPDRPTMSDVVSMIGNENSRLARNMEENFSVNAITDSLVEAR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01758 674 ProSiteProfiles PAN/Apple domain profile. 338 417 IPR003609 -
Rops3g01758 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Rops3g01758 674 Gene3D - 18 146 IPR036426 -
Rops3g01758 674 SMART blect_4 29 149 IPR001480 -
Rops3g01758 674 SUPERFAMILY Protein kinase-like (PK-like) 475 645 IPR011009 -
Rops3g01758 674 Gene3D Hepatocyte Growth Factor 335 407 - -
Rops3g01758 674 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Rops3g01758 674 CDD B_lectin 36 149 IPR001480 -
Rops3g01758 674 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Rops3g01758 674 Pfam PAN-like domain 338 389 IPR003609 -
Rops3g01758 674 ProSiteProfiles Protein kinase domain profile. 491 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01758 674 Pfam D-mannose binding lectin 70 175 IPR001480 -
Rops3g01758 674 Pfam Protein tyrosine and serine/threonine kinase 552 645 IPR001245 GO:0004672|GO:0006468
Rops3g01758 674 Pfam Protein tyrosine and serine/threonine kinase 495 551 IPR001245 GO:0004672|GO:0006468
Rops3g01758 674 Gene3D Transferase(Phosphotransferase) domain 1 556 671 - -
Rops3g01758 674 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 633 - -
Rops3g01758 674 SMART tyrkin_6 491 646 IPR020635 GO:0004713|GO:0006468
Rops3g01758 674 ProSiteProfiles EGF-like domain profile. 282 319 IPR000742 -
Rops3g01758 674 Gene3D Phosphorylase Kinase; domain 1 465 555 - -
Rops3g01758 674 CDD PAN_AP_plant 335 390 - -
Rops3g01758 674 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01758 Rops-Chr3 29793528 29797047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01758 530 642 Receptor kinase-like Gene Family AT4G23250 45.217 1.16e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01758 S_locus_glycop 7.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01758 - - cave:132173742 554.673