Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01755 ATGAATAATGTTAGAATGTTACCAATATGCTCTCTTTTATTTATCTTCATGAGAACCACCACTTCACTAGACAGTATTGTTCCAGGTCAATCCATCCTATATCATGAGACATTAGTTTCAGCCTCTGCCGTTTTTGAACTTGGGTTTTTCAGACCTGGAAATTCTAATAGTCTATATGTTGGAATATGGTACAAGGATTCTCCTTCAACAGTGGTATGGGTGGCCAACAGAGAAGCACCACTTTACAACACATCTGGAGTTTTACAAATTAATGATCAAGGAGTTCTTGTCCTTCTTAATGGCACAAAGAGCATTGTTTGGTCATCCAATATATCAAGCAAAGCAGAGAATCCAACTGCACAGCTCTTGGACTCTGGGAATCTTGTTGTTAGAAATGGACATGACAACAACCAGGGTCATCTATTGTGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGAAACTGAACTAGACAGGTTTCTGTCATCTTGGAAAAGTGCAAATGATCCTGGTCAGGGTGACTACACAGCTAAAATAGACATTCGAGGCTACCCACAAATAGTTTTTCTGAAAGGAAATGTTATAAAGTTTAGAGGAGCAGGATTTTATAGTGGTCTTAATTTTACAGGAAATCTACCAATACATTCTAATTTAATATATAGATCAGAATTTGTGTTCAATGAAAAAGAAGTATATTTTAAGTATGAGACTCCGAATAGATCGGTTTTCTCAAGGTTTGTTCTCCCCACTTCAGGCATTGTGCAGGATTTAGTCTGGACAAGTCAAACAAGCAGCTGGGATGTAATCTCGATAAACCTAGAAGATCAGTATCAGTGTGTAGATTATGCTTTGTGTGGTGCATATTCAATCTGCAATGATATTAACAATGCTCCTGTCTGTGCATGCCTGAAAGGATTTGTACCCAAACATCCAGAAGAATGGAATATGTCACATTGGTCTAACGGTTGCATTCGCAGCATTCCACTGGATTGTAATAACAACGATGGCTTCCTGACGTACAGGGGTTTGAAGTTACCAGACACTTCATCTTCATGGTATAACAAGACCATGGACCTTATGGAATGCCAGAAATCTTGTCTGCGTAACTGTTCCTGTTCAGCATATGCAAACTTTGATATGCGAGGTGGAGGAAGTGGCTGCGTACTTTGGTTTGACGGTCTGATTGACATGAGTCAATTGCCTCAATTTGGACAGGACCTTTATGTACGAGTTCCTGCTTCAGAGCTAGGTTCAAACATAACGAATGAAACAGAACCCGGGAATGCATTTGGTGGGCATGAAAACAAGCAGAGGGATCTACTTCTAATTGTTCTACCGATCTCATTATTAACATTGCTTATTTTGATGGGCCTATTCGTTTACTGGATTAGAAGGCAAAGGGGGAAAGGGGAAGATTTGTTACTTTTTGAAGTAGGCATGACAACTAATAAATTTTCAGATGCAAATAAACTTGGTGAAGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCCGTAAAGAGGCTATCCAGAAGATCTAGTCAAGGATGGGTGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAATCTTGTTCGACTTCTGGGCTGTTGCATTGATCGAAATGAAAAGATGCTGATATATGAATTTATGTCTAATAAAAGCTTGGATTGCTTTCTTTTTGATACAACAAAAAGAAGGATGCTAGATTGGCGAACGCGAGTTCGGATAATTGATGGGATTGCCCAAGGACTCCTTTATCTTCATCAATATTCCAGGTTTCGGATCATTCATCGAGATTTAAAAGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCAAGAATATTTAGAGAGAATGAACTTCAAGGAAATACAAATCGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCCATGGAAGGCCTTTTCTCAATAAAATCTGACGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTATAAGTGGCAAGAAGAATACAGGTTTTTATCAAACAAAGTCCCTCAGTCTTCTTGGATATGCTTGGGATCTATGGACAAGCAATTCGGGAGTGGACCTGATGGATCCAGCACTGGAAGATATTTCCAATAAGCATGTAGTGCCGAGATATGTGAACATAGGACTTCTCTGTGTTCAAGAAAGTCCAGCAGATAGACCAACCATGTCTGATGTGGTATCAATGATTGGCAATGACACTGCAGCCCTTCCTTTTCCGAAGCCACCTGCATTTCTAAATGTGAGAGATAATGAAAATTCAAGATTTGCCAGAAACATGGAAGAAAAATTTTCTGTGAATCTTATCACTGATTCACTTGTGGAAGCAAGATGA 2439 0.3916 MNNVRMLPICSLLFIFMRTTTSLDSIVPGQSILYHETLVSASAVFELGFFRPGNSNSLYVGIWYKDSPSTVVWVANREAPLYNTSGVLQINDQGVLVLLNGTKSIVWSSNISSKAENPTAQLLDSGNLVVRNGHDNNQGHLLWQSFDYPCDTLLPGMKLGWNLETELDRFLSSWKSANDPGQGDYTAKIDIRGYPQIVFLKGNVIKFRGAGFYSGLNFTGNLPIHSNLIYRSEFVFNEKEVYFKYETPNRSVFSRFVLPTSGIVQDLVWTSQTSSWDVISINLEDQYQCVDYALCGAYSICNDINNAPVCACLKGFVPKHPEEWNMSHWSNGCIRSIPLDCNNNDGFLTYRGLKLPDTSSSWYNKTMDLMECQKSCLRNCSCSAYANFDMRGGGSGCVLWFDGLIDMSQLPQFGQDLYVRVPASELGSNITNETEPGNAFGGHENKQRDLLLIVLPISLLTLLILMGLFVYWIRRQRGKGEDLLLFEVGMTTNKFSDANKLGEGGFGPVYKGKLLNGDEVAVKRLSRRSSQGWVELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMSNKSLDCFLFDTTKRRMLDWRTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFRENELQGNTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTKSLSLLGYAWDLWTSNSGVDLMDPALEDISNKHVVPRYVNIGLLCVQESPADRPTMSDVVSMIGNDTAALPFPKPPAFLNVRDNENSRFARNMEEKFSVNLITDSLVEAR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01755 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Rops3g01755 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Rops3g01755 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 756 - -
Rops3g01755 812 CDD B_lectin 36 149 IPR001480 -
Rops3g01755 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 421 - -
Rops3g01755 812 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Rops3g01755 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Rops3g01755 812 SUPERFAMILY Protein kinase-like (PK-like) 485 788 IPR011009 -
Rops3g01755 812 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Rops3g01755 812 Pfam PAN-like domain 341 407 IPR003609 -
Rops3g01755 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Rops3g01755 812 ProSiteProfiles Protein kinase domain profile. 495 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01755 812 Pfam Protein tyrosine and serine/threonine kinase 499 764 IPR001245 GO:0004672|GO:0006468
Rops3g01755 812 FunFam Uncharacterized protein 473 570 - -
Rops3g01755 812 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Rops3g01755 812 SMART serkin_6 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01755 812 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Rops3g01755 812 Pfam D-mannose binding lectin 70 175 IPR001480 -
Rops3g01755 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 773 - -
Rops3g01755 812 Gene3D - 18 146 IPR036426 -
Rops3g01755 812 Gene3D Hepatocyte Growth Factor 338 418 - -
Rops3g01755 812 SMART ntp_6 342 421 IPR003609 -
Rops3g01755 812 CDD STKc_IRAK 501 765 - -
Rops3g01755 812 Gene3D Phosphorylase Kinase; domain 1 474 570 - -
Rops3g01755 812 Gene3D Transferase(Phosphotransferase) domain 1 571 771 - -
Rops3g01755 812 CDD PAN_AP_plant 338 422 - -
Rops3g01755 812 SMART blect_4 29 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01755 Rops-Chr3 29716943 29720764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01755 450 781 Receptor kinase-like Gene Family AT4G23190 55.429 1.54e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01755 PK_Tyr_Ser-Thr 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01755 - - cave:132173745 867.07