Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01750 ATGAGATATTCTGCTTGTTTGAGGGAGCTCGGGTGCATTAGCCAAGAATGCATGGGGCTGCATCTGCGCATGAAGCACGTGACAAGTCAGGAATTTGTAGCTGCTATCAGAAGAAAGAGCAGTGGTTTCTCGAGGGGTGCATCAATGTATCACGGAGTCACAAGGCATCACCAACATGGGCGATGGCAAGCGAGGGTTGGAAAAATAGCGGCATTGGCAATTCGAAGTGGGAATGGTTTACTGCTTAAAGGTGGAAAGGAAGCCCTAAGATCAAATGTTGTCTTACACAAGGTCATTACTTCAGCCATTCCAAATACTGTGGGTAACAAACATATTGGGCTCGTGACTTCAAGAGATGAAATTCCAGATTTACTCAAGCTTGATGATGTGATAGATCTTGTGGTCCTCCAACGCATCATTTGCGGCCCCACATGCCTTACTCACGGACGTTTTTTTTCTCTTCTTTACAACCCCCAAAGTTATCACAGATTGGTTTCCTCCCCATGCTCTTTGTTCACACGAGAAACACGAGTGGTGCATGTTGGCCAGTCCTTTACTTTATATGGAGGTACAAGCAGGGAACTCTCAGAGCAAGAATGGAATGCATACGACCTACGCATGCATGGACGATGGAAGGGCCTTCATGGCAAGGTAGTAAAATTGGTCCTTCAGGTTGCTCGTGGCCCCTATAGCATTTGCGGGGACTCTCAGTGCATGGGCAAAGCGTATGCAACTTGCATGAATATGGAGATGACAGGGTTGTGTTGTGGGTCCCCTTTAACTAGCTTTGTTGGGACTATCATACCACCAAGCCACACAACTCAATGGGCCAACAGTGGCGTGGGAAGCAATGCTTGGGGAGCTACGACAGCATGGGCTAGCAATAGTGGCGTGGGGCACAGCCTTGGGAGCTACGTGAAAAAGTTATTTCTGTTGGACAAGTTAGGGAGTCCAGGGAGGGCATGTTGGTGA 972 0.4815 MRYSACLRELGCISQECMGLHLRMKHVTSQEFVAAIRRKSSGFSRGASMYHGVTRHHQHGRWQARVGKIAALAIRSGNGLLLKGGKEALRSNVVLHKVITSAIPNTVGNKHIGLVTSRDEIPDLLKLDDVIDLVVLQRIICGPTCLTHGRFFSLLYNPQSYHRLVSSPCSLFTRETRVVHVGQSFTLYGGTSRELSEQEWNAYDLRMHGRWKGLHGKVVKLVLQVARGPYSICGDSQCMGKAYATCMNMEMTGLCCGSPLTSFVGTIIPPSHTTQWANSGVGSNAWGATTAWASNSGVGHSLGSYVKKLFLLDKLGSPGRACW* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01750 323 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 68 136 - -
Rops3g01750 323 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 137 IPR016162 GO:0016491
Rops3g01750 323 SUPERFAMILY ALDH-like 68 135 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01750 Rops-Chr3 29657537 29659234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01750 23 70 AP2-EREBP Transcription Factor Family AT3G20840 85.417 7.24e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01750 K12657 - ncol:116256258 100.908