Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01743 ATGAGAACCTCCACTTCATTGGACAGATTATCAATAAATCAGTCTATTAGAGATGGTGAGACTTTAGTTTCAGCCGGTGGAACTTTCGAAGTGGGTTTCTTCAGCCCTGGAAATTCCAAAGGTCGATACTTGGGTATATGGTTGACGAATATATCCACAATGAAAGTAGCATGGGTGGCCAACCGAGAAAGACCACTCCAGAACAAATCAGGAGTTTTAAAATTCAATGACAAGGGAGTTTTTCTGCTTCTCACTGGCGAAAACAGCACTGCTTGGTCATCTAATATATCGAGCAAAGTAGTAAGTAATCCAATTTTACAGCTCTTGGACTCTGGAAATCTTGTGGTGAAAAATGGACAAGAGATTAACGAGGATAACTTCATATGGCAAAGTTTTGATTATCCCTGTGATACATTATTGCCAGGAATGAAGCTGGGATGGAACTTAGTAACCCATCAAGACAGGTTTCTATCATCTTGGAGAAGTGCAGATGATCCTGCTGTGGGAGAGTATTCTTGTAAAGTTGACCTCAGAGGATATCCGCAAATTTTTGCATTCAAGGGATCCCATATAAAGGTTAGAATAGGATGGAATGGCCTTGCTTTTATGGGATATCCAGTTCAACGCAAACAGTTTAGATTTGAATTTGTGTTGAATGATAAAGAGGTGTATTTTATGAATGAACTCTTGGATAGATCAACTCTCTCTGTCTCCATGCATTCGTTGACCCCTTCAGGCAACCGCCAGCGTTTGGTTATGCTAAATCAAACAAGAAGCCCAGAGATTATCACACATGATGCAGACGAGTGTGAAAATTATGCCTTGTGTGGTGCAAATTCTATATGCAAAATGGGTGGTAACTCTGCAACTTGTGAATGCCTAAAAGGATTTGCACCCAAGTTTCCTGAAGAATGGAATATGTCGTTTTGGTCTAGTGGCTGTGTTCGAAAGACCAAGTTGGATTGTAATTATAAAGATGGTTTCTGGAAATACGAAAATATAAAATTACCAGACACATCTTCCTCATGGTATAGTAAGACCATAGACCTCGAGGAATGTCAGAAGTTGTGTCTGCAAAACTGTTCTTGTACATCATATGCAAATTTGGATATCCGTGATGGAGGAAGTGGCTGTTTACTTTGGTTTCATGATCTGATTGACTTGAGGATATTTTCTCAATGGGGACAAGATCTTTATGTCAGAGTCCATGCTTCGGAGCTAGATTATGTTGCAATCAATGGCCATGGAAAAAACAAGAAAAAGCTGGTAGGAATCACGGTCGGTGTAATTATTTTTGGATTAACTACATGTGTCTGCATAATAATATTCAAAAAGAAAGGAGTAACAGCAATTATTTATAGCAAGCATCTCAAAAATAAAGTGAGGAAGGAAGACATTGATATGCCAACATTTGATTTCCTAACCATAGAAAAAGCTACTGAAAACTTTTCAAGTAGTAACAAACTTGGCGAAGGTGGTTTTGGACCTGTATACAAGGGCACGCTGAAGGATGGGCAAGAGTTAGCTGTGAAAAGGCTTTCAAAGAAGTCAGGACAAGGGTCAGAGGAGTTCAAAAATGAAGTGGCATTGATTGCCAAACTTCAGCACCGTAATCTTGTCAAGCTTATAGGTTGCTGCATCGAAGGAGAAGAAAAAATGTTGATCTATGAATACATGCCCAACAAAAGCTTGGACTATTTTATTTTTGATGAAACTAGAAGGAAGTTGGTAGATTGGCATAAGCGTTTCAACATTATTGGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAGGACTCTAGATTGAGAATTGTTCATAGGGATTTGAAGACCAGCAATATTCTACTAGATGCAAATTTGGATCCTAAAATATCAGACTTTGGCCTTGCTCGAACATTTTGGGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCTCGAGGGCATTTCTCAATGAAATCAGATGTCTTTAGTTATGGTGTTATAATACTAGAGATTGTAAGTGGAAAGAAGAACAGAGATTTTTCAGATGCAGAACATTGCCTTAATCTTCTTGGACACGCATGGAGATTGTGGACTGAAGAGAGGGCATTGGAACTTCTGGATGGAATGTTAAGGGAAGGATTCATGCCTTCTGAAGTCATACGATGTATACAGGTGGGTCTGTTATGCGTACAACAAAGACCAAAAGATAGACCAGACATATCATCAGTGGTTCCAATGTTGAATGGAGAGAAATTATTGCCCAGTCCAAAGGTTCCTGGTTTTTACATAGAGCAAGATGTTAAACCTGAAGCAGATCAATTGCATGCAAATAGTGAATTGTTCGCATCCAACGAAATGTCCATCACATTAGAAGCAAGATAG 2403 0.3937 MRTSTSLDRLSINQSIRDGETLVSAGGTFEVGFFSPGNSKGRYLGIWLTNISTMKVAWVANRERPLQNKSGVLKFNDKGVFLLLTGENSTAWSSNISSKVVSNPILQLLDSGNLVVKNGQEINEDNFIWQSFDYPCDTLLPGMKLGWNLVTHQDRFLSSWRSADDPAVGEYSCKVDLRGYPQIFAFKGSHIKVRIGWNGLAFMGYPVQRKQFRFEFVLNDKEVYFMNELLDRSTLSVSMHSLTPSGNRQRLVMLNQTRSPEIITHDADECENYALCGANSICKMGGNSATCECLKGFAPKFPEEWNMSFWSSGCVRKTKLDCNYKDGFWKYENIKLPDTSSSWYSKTIDLEECQKLCLQNCSCTSYANLDIRDGGSGCLLWFHDLIDLRIFSQWGQDLYVRVHASELDYVAINGHGKNKKKLVGITVGVIIFGLTTCVCIIIFKKKGVTAIIYSKHLKNKVRKEDIDMPTFDFLTIEKATENFSSSNKLGEGGFGPVYKGTLKDGQELAVKRLSKKSGQGSEEFKNEVALIAKLQHRNLVKLIGCCIEGEEKMLIYEYMPNKSLDYFIFDETRRKLVDWHKRFNIIGGIARGLLYLHQDSRLRIVHRDLKTSNILLDANLDPKISDFGLARTFWGDQVEANTNRVAGTYGYMPPEYAARGHFSMKSDVFSYGVIILEIVSGKKNRDFSDAEHCLNLLGHAWRLWTEERALELLDGMLREGFMPSEVIRCIQVGLLCVQQRPKDRPDISSVVPMLNGEKLLPSPKVPGFYIEQDVKPEADQLHANSELFASNEMSITLEAR* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01743 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 448 558 - -
Rops3g01743 800 SUPERFAMILY Hairpin loop containing domain-like 323 396 - -
Rops3g01743 800 SMART blect_4 13 135 IPR001480 -
Rops3g01743 800 CDD EGF_CA 266 297 - -
Rops3g01743 800 ProSiteProfiles Bulb-type lectin domain profile. 7 129 IPR001480 -
Rops3g01743 800 ProSiteProfiles EGF-like domain profile. 266 303 IPR000742 -
Rops3g01743 800 Pfam PAN-like domain 322 388 IPR003609 -
Rops3g01743 800 Pfam Protein tyrosine and serine/threonine kinase 486 753 IPR001245 GO:0004672|GO:0006468
Rops3g01743 800 Pfam S-locus glycoprotein domain 197 301 IPR000858 GO:0048544
Rops3g01743 800 ProSiteProfiles PAN/Apple domain profile. 322 403 IPR003609 -
Rops3g01743 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Rops3g01743 800 FunFam - 559 763 - -
Rops3g01743 800 Gene3D Transferase(Phosphotransferase) domain 1 559 760 - -
Rops3g01743 800 SMART ntp_6 323 402 IPR003609 -
Rops3g01743 800 SUPERFAMILY Protein kinase-like (PK-like) 466 766 IPR011009 -
Rops3g01743 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 321 402 - -
Rops3g01743 800 CDD B_lectin 13 135 IPR001480 -
Rops3g01743 800 ProSiteProfiles Protein kinase domain profile. 483 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01743 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Rops3g01743 800 Pfam D-mannose binding lectin 56 161 IPR001480 -
Rops3g01743 800 CDD STKc_IRAK 489 756 - -
Rops3g01743 800 Gene3D Hepatocyte Growth Factor 319 397 - -
Rops3g01743 800 SMART egfca_6 266 303 IPR001881 GO:0005509
Rops3g01743 800 SMART serkin_6 483 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01743 800 CDD PAN_AP_plant 318 402 - -
Rops3g01743 800 Gene3D Phosphorylase Kinase; domain 1 446 558 - -
Rops3g01743 800 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 741 - -
Rops3g01743 800 Gene3D - 3 132 IPR036426 -
Rops3g01743 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 132 - -
Rops3g01743 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 166 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01743 Rops-Chr3 29467534 29471392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01743 467 771 Receptor kinase-like Gene Family AT4G23140 58.654 7.47e-129 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01743 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01743 - - gmx:100790261 1154.43