Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01740 ATGGCTTCCAAGGACCGTGAGAACTTTGTCTATGTTGCCAAGTTAGCTGAGCAAGCTGAACGCTATGATGAAATGGTCGATGCTATAAAGAAGGTGGTTAAGATGGATGTTGAGTTGAGTGTGGAAGAGAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTTGATGCAACATGATGAGTTCGTGGAGAGTTTAGGTCTCAGCAACCAACCATGGCCATTGTCAAGTGCGGAGCAACGAAACCGATGGATCATCATCATCGGAAATAGAACAAGAGTTGACATGTTGTAA 297 0.4444 MASKDRENFVYVAKLAEQAERYDEMVDAIKKVVKMDVELSVEERNLFSVGYKNVVGLMQHDEFVESLGLSNQPWPLSSAEQRNRWIIIIGNRTRVDML* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01740 98 Pfam 14-3-3 protein 13 56 IPR023410 -
Rops3g01740 98 Gene3D - 1 64 IPR036815 -
Rops3g01740 98 PANTHER 14-3-3 PROTEIN 6 57 IPR000308 -
Rops3g01740 98 SUPERFAMILY 14-3-3 protein 5 58 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01740 Rops-Chr3 29398872 29399401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01740 2 56 14-3-3 family AT1G26480 69.091 6.02e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01740 K06630 - gmx:100806167 101.679