Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01739 ATGAGAACTTGCAGTTCCCTAGACAGTTTAGCCGTGAATCAATATATCCGAGATGGCAAGACTTTAGTTTCAGCAAACGGAACTTTTGAAGTGGGTTTCTTCAGTCCTGGAAGATCAACAAGAAGATATTTGGGTATATGGTACAAGAATTTATCCCCTTTCACGGTTGTGTGGGTGGCTAACCGGGAAACACCACTCCAGAATAACTCAGGTGTCTTCAAGCTCAATGAAAAAGGGGTTCTTGTGATTCTCAATGGCACCAACAGCACGGTTTGGTCATCCACTGTGTCAAACAAAGCAATCAGTAATTCCATGATTGCACAGGTCTTGGACTTTGGAAATCTTGTGGTGAAAAATGGACATGAGGACAAGTTTTTGTGGCAGAGTTTTGATTATCCATGTCACACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACTGGTTTAAACAGGTTTCAATCTTCTTGGAAGAGTGCAGATGATCCAGCTAAGGGAGAGTATTCTATGACTATTGACATTAGAGGATATCCCCAACTTGTTCTTATGAAAGGATCTGATATAACATTGAGAATAGGGTCATGGAATGGCCTTGGTTTTACTGGATATCCAATTCAACAATTGAAACAGAAGCAAAGATATATTTTTGTCATGAATGCAAAAGAAGTGTATCATCAGCATGAAGTCATTGATAGCTCCGTTGTGTCCATATACACACTGACCCCTTCAGGCATTTTTCAGGGCTTAGTTTGGACAAGTCCAACAAGCAGTAGGCTTGAAAGGTCACGCTCAAGTAGAGGCCACTATCATGATGGCCATGGAAACAAGAAGAAGCTGACAGGAATCATACGTGGTGTGATTATTTTTGGATTCATTACATGTTTCTCCATGATAATACATCGAAAGCAAGTGGCAGCAAGAGTATATCATCTTGAACCATTTCAATGGCAACAAGAATATTTTAGATTGAGGAAGGAAGACATGGATCTACAAATATTTGATTTGTCAATCATTGCTAGAGCCACTAATGATTTTTCTAGCAGCGATAAACTGGGGGAAGGGGGATTTGGACCAGTGTATAAGGGTACACTGATAGATGGGAAAGAAGTAGCCATCAAGCGACACTCAAATATGTCAGATCAAGGATTGGAGGAGTTTAAAAATGAAGTAGTATTGATTGCAAAACTCCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAGGAAAAAATATTGATCTATGAATACATGCCAAACAAGAGCTTAGATTACTTCATCTTTGATGAAAATAGAAGCAAGCTCTTGACCTGGCCTCAGCGTTTCCACATCATTGGTGGCATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTAGACTCAGAATTATTCACAGAGATTTGAAAACCAGCAATGTCCTACTGGATGCTCATATGAATCCAAAAATCTCAGACTTTGGCTTGGCTCGGACTTTTGGGGGAGATCAAGTTGAAGCAAAAACAAAAAAAATGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTATGCATGGCCATTACTCTGTGAAATCAGATGTCTTTAGTTTTGGTGTAATAGTACTAGAGATAGTTAGTGGAAAGAAGAATAAGGGATTTTCGGACCCAGAACGCTCTCTTAATCTTCTTGGACATGCTCTGGACTGA 1698 0.4011 MRTCSSLDSLAVNQYIRDGKTLVSANGTFEVGFFSPGRSTRRYLGIWYKNLSPFTVVWVANRETPLQNNSGVFKLNEKGVLVILNGTNSTVWSSTVSNKAISNSMIAQVLDFGNLVVKNGHEDKFLWQSFDYPCHTLLPGMKLGWNLVTGLNRFQSSWKSADDPAKGEYSMTIDIRGYPQLVLMKGSDITLRIGSWNGLGFTGYPIQQLKQKQRYIFVMNAKEVYHQHEVIDSSVVSIYTLTPSGIFQGLVWTSPTSSRLERSRSSRGHYHDGHGNKKKLTGIIRGVIIFGFITCFSMIIHRKQVAARVYHLEPFQWQQEYFRLRKEDMDLQIFDLSIIARATNDFSSSDKLGEGGFGPVYKGTLIDGKEVAIKRHSNMSDQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEGEEKILIYEYMPNKSLDYFIFDENRSKLLTWPQRFHIIGGIARGLLYLHQDSRLRIIHRDLKTSNVLLDAHMNPKISDFGLARTFGGDQVEAKTKKMVGTYGYMPPEYAMHGHYSVKSDVFSFGVIVLEIVSGKKNKGFSDPERSLNLLGHALD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01739 565 Gene3D - 4 130 IPR036426 -
Rops3g01739 565 FunFam Lectin-domain containing receptor kinase A4.3 422 565 - -
Rops3g01739 565 Pfam D-mannose binding lectin 55 159 IPR001480 -
Rops3g01739 565 SMART blect_4 13 133 IPR001480 -
Rops3g01739 565 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 130 - -
Rops3g01739 565 SMART serkin_6 346 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01739 565 Gene3D Phosphorylase Kinase; domain 1 320 421 - -
Rops3g01739 565 ProSiteProfiles Protein kinase domain profile. 346 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01739 565 Pfam Protein tyrosine and serine/threonine kinase 349 546 IPR001245 GO:0004672|GO:0006468
Rops3g01739 565 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 277 548 - -
Rops3g01739 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Rops3g01739 565 Gene3D Transferase(Phosphotransferase) domain 1 422 563 - -
Rops3g01739 565 CDD B_lectin 13 133 IPR001480 -
Rops3g01739 565 SUPERFAMILY Protein kinase-like (PK-like) 329 553 IPR011009 -
Rops3g01739 565 ProSiteProfiles Bulb-type lectin domain profile. 7 130 IPR001480 -
Rops3g01739 565 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 421 - -
Rops3g01739 565 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 164 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01739 Rops-Chr3 29389993 29392631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01739 334 550 Receptor kinase-like Gene Family AT4G05200 69.124 4.15e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01739 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01739 - - pmum:103343656 607.446