Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01738 ATGGACAGCTACACAATGTTATTTATTTGGTTCTTTTTCCTCTCCTACATTAGAACTTCCGCTTCACTAGACAGTTTAGCTGTGAATCAATCTATCCGAGATGGCCAGACTTTAGTTTCAGCAGGCGAAACTTTTGAAGTGGGTTTCTTCAGTCCTGGAAGATCAACAAGAAGATATTTAGGTATATGGTACAAAAATTTATCCCCTTTCACAGTTGTGTGGGTGGCTAACCGGGAAACACCACTCCGGAATAAGTCAGGTGTCTTCAAGCTCAATGAAAAGGGGGTTCTTGTGATTCTCAATGGTACCAACAGCACGGTTTGGTCATCCACTGTATCAAATAAAGCAATCAATAATTCAATGATTGCACAGGTCTTGGACTCTGGAAATCTTGTGGTGCAAAATGGACAGGATACCAATGAGGACAAGTTTTTGTGGCAAAGTTTTGATTATCCATGTCACACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACTGGTCTAGAGATGTTTACATCATCTTGGAAGAGTGCAGATGATCCAGCTAAGGGAGAGTATTCTATAAAAATGGATATTAGAGGATATCCCCAACTAGTTTTTATGAAAGGATCTGATATAAAATTCAGAATCGGGTCATGGAACGGCCTTGGTTTTACGGGACATCCAATTCAACAATTGAAACAGAAGCAAAAATATGAATTTGTCATGAATGCAAAAGAAGTGTATCATCAGCATGAAGTCAGTGATAGCTCCGTTGTGTCCATATATACACTGACCCCTTCAGGCATTTTGCAGGGTTTAGTTTGGACAAGTCCAACAAGCGGTAGGGTAGTTATCAACCCTGGGGCACAAGACATATGTGATAATTACGCCATGTGTGGTGTGAATTCTATATGCAATATGGATGGTAACATTCCCAAATGTGAATGCCTCAAAGGATATGTTCCTCACTTTCCTGAACAATGGAATATATCATATTGGTCAAACGGTTGTGCTCCAAGGAATAAATCTAATTGTACCAACAATAACACAGATGGCATCTGGAGGTACTATAACATCAAATTGCCAGACACGTCCTCATCATGGTATAACAAGACCATGAAACTTGTGGAGTGTCAGAAGTCATGTCTGAAAAACTGTTCTTGCACCGCATATGCAAATTTGGATATCCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTTGATGATCTCATTGACATAAGGAAATTCTCTCCATGGGGACAAGACCTTTATGTCAGAGTCCCTGCTTCAGAACTAGATCATGATGGCCATGGAAACAGGAAGAAGAAGCTGACAGGAATCATACTTGGTGTGATTATTTTTGGATTCATTACGTGTGTCTCGATGACAATACATCGCAAGAAAGTGGCAGCAAGAGTATGTCATCTTGAACCATTTCAGTGGCGACAAGAATATTTTAGATTGAGGAAGGAAGACATGGATCTACAAATATATGATTTGTCGATCATTGCTAGAGCTACTAATGATTTTTCTAGCAGCGATAAACTGGGGGAAGGGGGATTTGGACCAGTGTATAAGGGTACACTGATAGATGGGAAAGAAGTAGCCATCAAGCGACACTCAAATATGTCAGATCAAGGATTGGAGGAGTTTAAAAATGAAGTAGTATTGATTGCAAAACTCCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAGGAAAAAATATTGATCTATGAATACATGCCAAACAAGAGCTTAGATTACTTCATCTTTGATGAAAATAGAAGCAAGCTCTTGACCTGGCCTCAGCGTTTCCACATCATTGGTGGCATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTAGACTCAGAATTATTCACAGAGATTTGAAAACCAGCAATGTCCTACTGGATGCTCATATGAATCCAAAAATATCAGACTTTGGCTTGGCTCGGACTTTTGGGGGAGATCAAGTTGAAGCAAAAACAAAAAAAATGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTATGCATGGCCATTACTCTGTGAAATCAGATGTCTTTAGTTTTGGTGTAATAGTACTAGAGATAGTTAGTGGAAAGAAGAATAAGGGATTTTCGGACCCAGAACGCTCTCTTAATCTTCTTGGACATGCATGGAGACTCTGGACTGAAGACAAGCCACTGGAACTGATAGATAAACACTTACTTGAAACATACATTTCTTCTGAAGTCTTGCGATGCATACATGTTGGTTTGTTGTGCGTACAACAAAAACCAGGAGACAGGCCGGATATGTCTCTTGTCATTCTTATGTTGAATGGTGACAAATTATTGCCTCAGCCAAAGGCCCCTGGATTTTATATTGGAAGTGATTTACCTGAATCAGTATCCTCATCCTTGAATAAGATGTCTATTACAATATTTGAGGCAAGATAG 2451 0.3994 MDSYTMLFIWFFFLSYIRTSASLDSLAVNQSIRDGQTLVSAGETFEVGFFSPGRSTRRYLGIWYKNLSPFTVVWVANRETPLRNKSGVFKLNEKGVLVILNGTNSTVWSSTVSNKAINNSMIAQVLDSGNLVVQNGQDTNEDKFLWQSFDYPCHTLLPGMKLGWNLVTGLEMFTSSWKSADDPAKGEYSIKMDIRGYPQLVFMKGSDIKFRIGSWNGLGFTGHPIQQLKQKQKYEFVMNAKEVYHQHEVSDSSVVSIYTLTPSGILQGLVWTSPTSGRVVINPGAQDICDNYAMCGVNSICNMDGNIPKCECLKGYVPHFPEQWNISYWSNGCAPRNKSNCTNNNTDGIWRYYNIKLPDTSSSWYNKTMKLVECQKSCLKNCSCTAYANLDIRDGGSGCLLWFDDLIDIRKFSPWGQDLYVRVPASELDHDGHGNRKKKLTGIILGVIIFGFITCVSMTIHRKKVAARVCHLEPFQWRQEYFRLRKEDMDLQIYDLSIIARATNDFSSSDKLGEGGFGPVYKGTLIDGKEVAIKRHSNMSDQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEGEEKILIYEYMPNKSLDYFIFDENRSKLLTWPQRFHIIGGIARGLLYLHQDSRLRIIHRDLKTSNVLLDAHMNPKISDFGLARTFGGDQVEAKTKKMVGTYGYMPPEYAMHGHYSVKSDVFSFGVIVLEIVSGKKNKGFSDPERSLNLLGHAWRLWTEDKPLELIDKHLLETYISSEVLRCIHVGLLCVQQKPGDRPDMSLVILMLNGDKLLPQPKAPGFYIGSDLPESVSSSLNKMSITIFEAR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01738 816 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01738 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Rops3g01738 816 Gene3D - 18 149 IPR036426 -
Rops3g01738 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 581 - -
Rops3g01738 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 423 - -
Rops3g01738 816 Pfam D-mannose binding lectin 71 178 IPR001480 -
Rops3g01738 816 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Rops3g01738 816 SMART blect_4 29 152 IPR001480 -
Rops3g01738 816 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Rops3g01738 816 CDD STKc_IRAK 512 779 - -
Rops3g01738 816 Gene3D Hepatocyte Growth Factor 339 419 - -
Rops3g01738 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 767 - -
Rops3g01738 816 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Rops3g01738 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
Rops3g01738 816 SMART ntp_6 344 423 IPR003609 -
Rops3g01738 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 149 - -
Rops3g01738 816 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Rops3g01738 816 SMART serkin_6 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01738 816 Pfam PAN-like domain 341 409 IPR003609 -
Rops3g01738 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 183 IPR036426 -
Rops3g01738 816 CDD PAN_AP_plant 338 424 - -
Rops3g01738 816 SUPERFAMILY Protein kinase-like (PK-like) 490 777 IPR011009 -
Rops3g01738 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Rops3g01738 816 Pfam Protein tyrosine and serine/threonine kinase 509 720 IPR001245 GO:0004672|GO:0006468
Rops3g01738 816 Gene3D Phosphorylase Kinase; domain 1 480 581 - -
Rops3g01738 816 CDD B_lectin 29 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01738 Rops-Chr3 29378651 29390251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01738 494 816 Receptor kinase-like Gene Family AT4G11530 57.864 1.82e-128 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01738 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01738 - - aprc:113865090 1229.93