Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01735 ATGCTCATTGCCTTAAGAAGCATCACTCCAGACAAATCCATCCATTACAATGAGACCCTGGTTTCTGAATCTGGAACTTTTGAAGCTGGATTCTTCAAGTTGGGAGATTCACAGAGCCTATACTTTTGTATATGGTATAAGAGTCTAACACCTAGGACAATTGTATGGGTAGCCAATAGGGATATCCCATTAGATAACTCCACAGCAATTTTCAAAGTCACTGATGGAGGAAATCCAGTTATACTTGATGGGTCAGGGACCATAATCTGGTCCTCAATCGCATCAACAAATGTAGTGAAGCCTGTTCTTTTGCTCTTGGACACAGGAAACCTTGTTGTAAGAAATGGAAGTATCACTGGGAGCATTGTGTGGCAAAGCTTTGATTATCCTGGAGACACTTTACTCCCAGGGATGATACTTCAAATTAATAGGGTTAGTGGTGTGCATAATTCTTTGACATCTTGGAAAAACATAGGAGATCCAGCAAGAGGTGAATTTTCATACCATTTCGATGGTCATGGTTTTCCTCAACTAGTAATTACAAAGGGATCAACATTAATGTACAGACTAGGTTCTTGGAATGGATTTTTCTTCAGTGGGATTCCTTGGGAAACACTCTACAGTTACTTCAATTTCTCTTTTGAGTTAACTGAGCAGCGTTTCCTGTGGTCATATCAGACAGAAACATGGCAACTTTTCCTGGCTGGCCCTGTGGACCGGTGTGATAATTATGCCTTGTGTGGTGCAAATTCTGATTGCAATGTGAATGACACTCCTCAATGTGAATGCCTCACAGGTTTCACACCTAAATCTCCTGAAAAATGGAATTCATTAGATTATGCTGATGGGTGTGTTAGGAAGGTAAATTTGGATTGTGATAATAGAGATGGCTTTCTTAAGTATACAGGAATGAAGTTGCCAGACACATCTTCCTCATGGTTTGATAAGAATATGAATCTTCAGGAATGTCAAAAACAATGCTTGAAAAACTGCAGTTGCATAGCATATGCAAATTTGGATATTAGAGATGGTGGAAGTGGCTGTATGATTTGGTTTAATAACATCATGGATATGAGGAAAGAAAGTTCTGTAGGGCAAGAGATTTACATAAGAGTGGCTGCTTCAGAATTAGGTAATTCAATAAATAACACAAATAAAAAAAAGCTAGCAGGTATTCTAGCAGGAAGTGGAACACTCCTCTTGGGCATCACAGTAGTTGGATATGTCATCTATCGAAAGAGGAAGAAACTTGGGAAGTCAGGTAGGGAGACAACAATTAACCAGGAGGATCACAATGAGAATAATGAGAAGGAAAACATTGATTTTCCAACATTTGATTTTTCAACCATAGCCAATGCCACTGATCACTTCTCTCCCAGTAACATATTGGGAGAAGGTGGATATGGACCAGTTTACAAGGGCGCACTAACAGATGGGAGAGAGATTGCTGTCAAACGGCTTTCCTTGAAATCTGGACAAGGACCACAGGAGTTCAAAAACGAAATTCTGTTGATTGCCAATCTTCAGCATCGAAATCTTGTGAAACTTCTCGGTTGTTGCATTCAAAATGATGAAAGAATCCTAATCTATGAGTACATTTGTAACAGAAGTTTGGACAACTTTATTTTTGATCAAACTAGAAGTAAAGTACTGGATTGGAATAAACGCTTCAATATTATAAGTGGAATTGCTCGAGGGCTTCTTTATCTCCATCAAGACTCTAGACTAAGGGTCATCCACAGAGATCTAAAAACCAGTAATATTCTTCTTGACAATGATATGAACCCAAAAATATCTGACTTTGGACTGGCCCGGGCTTTTGATGGTGATCATGTTGAGGCCACAACAATAAGAGTAGTGGGAACTCATGGTTATATGCCCCCTGAGTATGCAGTATATGGGTCCTTTTCAGTGAAGTCTGATGTCTTTAGCTTTGGTGTTATTGTACTGGAGATGGTTAGTGGGAGGAAGAACAGAGAATTTTGTGATCCACAACATAATCTTAACCTTCTTGGACATGCATGGAGACTCTCGAGTGAGGATAGACCATTGGAGCTGATAGATGATTGTCTCAATGATTCAGTTATTCTAGCTGAGGCATTAAGATGTATTCACATAGGGCTTCTGTGTGTGCAAGAGAGACCAGATGATAGGCCAGATATGTCATCTGTTGTTCTAATGTTGAATGGTGAGAAAGCATTGCCTAATCCAAGGCAACCCGGGTTTTATCCACATGAAGTAGTCTCTTCCTCAAGCAAGCGTGAACTGTCTTCAACAAATGAACTTTCCCTTTCATTGTTACAGCCAAGATAG 2313 0.3969 MLIALRSITPDKSIHYNETLVSESGTFEAGFFKLGDSQSLYFCIWYKSLTPRTIVWVANRDIPLDNSTAIFKVTDGGNPVILDGSGTIIWSSIASTNVVKPVLLLLDTGNLVVRNGSITGSIVWQSFDYPGDTLLPGMILQINRVSGVHNSLTSWKNIGDPARGEFSYHFDGHGFPQLVITKGSTLMYRLGSWNGFFFSGIPWETLYSYFNFSFELTEQRFLWSYQTETWQLFLAGPVDRCDNYALCGANSDCNVNDTPQCECLTGFTPKSPEKWNSLDYADGCVRKVNLDCDNRDGFLKYTGMKLPDTSSSWFDKNMNLQECQKQCLKNCSCIAYANLDIRDGGSGCMIWFNNIMDMRKESSVGQEIYIRVAASELGNSINNTNKKKLAGILAGSGTLLLGITVVGYVIYRKRKKLGKSGRETTINQEDHNENNEKENIDFPTFDFSTIANATDHFSPSNILGEGGYGPVYKGALTDGREIAVKRLSLKSGQGPQEFKNEILLIANLQHRNLVKLLGCCIQNDERILIYEYICNRSLDNFIFDQTRSKVLDWNKRFNIISGIARGLLYLHQDSRLRVIHRDLKTSNILLDNDMNPKISDFGLARAFDGDHVEATTIRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEMVSGRKNREFCDPQHNLNLLGHAWRLSSEDRPLELIDDCLNDSVILAEALRCIHIGLLCVQERPDDRPDMSSVVLMLNGEKALPNPRQPGFYPHEVVSSSSKRELSSTNELSLSLLQPR* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01735 770 SMART serkin_6 457 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01735 770 ProSiteProfiles EGF-like domain profile. 237 273 IPR000742 -
Rops3g01735 770 PIRSF SRK 206 770 IPR024171 GO:0004674
Rops3g01735 770 PIRSF SRK 2 220 IPR024171 GO:0004674
Rops3g01735 770 Pfam Protein kinase domain 460 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01735 770 Gene3D Hepatocyte Growth Factor 289 369 - -
Rops3g01735 770 SMART blect_4 11 130 IPR001480 -
Rops3g01735 770 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 715 - -
Rops3g01735 770 CDD B_lectin 17 130 IPR001480 -
Rops3g01735 770 Pfam D-mannose binding lectin 53 156 IPR001480 -
Rops3g01735 770 Gene3D Transferase(Phosphotransferase) domain 1 534 736 - -
Rops3g01735 770 ProSiteProfiles Bulb-type lectin domain profile. 5 126 IPR001480 -
Rops3g01735 770 Pfam PAN-like domain 292 358 IPR003609 -
Rops3g01735 770 Gene3D Phosphorylase Kinase; domain 1 430 532 - -
Rops3g01735 770 ProSiteProfiles PAN/Apple domain profile. 292 373 IPR003609 -
Rops3g01735 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 533 736 - -
Rops3g01735 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 291 372 - -
Rops3g01735 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Rops3g01735 770 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 160 IPR036426 -
Rops3g01735 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 421 532 - -
Rops3g01735 770 Gene3D - 4 127 IPR036426 -
Rops3g01735 770 CDD STKc_IRAK 463 730 - -
Rops3g01735 770 CDD PAN_AP_plant 288 373 - -
Rops3g01735 770 SMART ntp_6 293 372 IPR003609 -
Rops3g01735 770 ProSiteProfiles Protein kinase domain profile. 457 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01735 770 Pfam S-locus glycoprotein domain 207 271 IPR000858 GO:0048544
Rops3g01735 770 SUPERFAMILY Protein kinase-like (PK-like) 440 728 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01735 Rops-Chr3 29332297 29336095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01735 374 745 Receptor kinase-like Gene Family AT4G23190 48.947 5.15e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01735 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01735 - - ccaj:109805721 1018.84