Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01734 ATGCCCAGGTTCGACACACAGGACACTATTTCTACTGGAAAATCTATCAAAAGTAATGAGACTCTAATCTCACCAGCAGGAACTTTTGAAGCAGGATTCTTCAGCTTTGGAAATTCAAATAACCAATACTTGGGTATATGGTACAAGAATATTACTCCAAGAACAGTTGTGTGGGTGGCCAATAGAGATATCCCACTGGGAAACTCCTCAGGAGTTTTGCAGGTCACTGATGCAGGAAAACTTGTTATTCTCGATGGCACAGGAGCAACTATCTGGTCCTCCAATGTATCAGAAACTGCAAGGAACCCAGTTGTGCAGCTCTTGAATTCTGGAAATCTTGTTGTGAAAGAAGCAAATAGTACTGGGAATTTTCTTTGGCAGAGTTTTGATTATCCTGGTGACACTTTACTTGCAGGGATGAGGCTACAAAGTAACAAGGTAAGTGGTCAGCAAACATCTCTGACATCTTGGAGAAACACAGAAGATCCTGCTATGGGGGAGTTTGAATTGCATGTAGATACTCATGGCCTTCCTCAATTAGTTATTACAAAGGGAGGTACTTCATTGTTCAGAGCAGGTTCATGGAATGGCTATCTTTTATCTGGGATTGCATCAGAAACACTGACTAGATACTTTAATTTTAGTTTCGTGTTTACTGGGCAGGAAGTTTCTTTTGGATATGAACTCTTAAGGAGTTCTACTGTTCTGACATACACACTCACTCCAACCGGAATTTTGCAAAGTTTTGTGTGGTCAGATCAAGCACAGAGTTGGCAGCTTTTACTAACTGGCCCTGTAGACCAGTGTGACAATTATGCCATTTGTGGTGCAAATGCTAATTGTGATGTTAAAAACTCTCCAATATGTGAATGCTTGGAGGGTTTCATTCCCAAATCTCAAGAAATATGGAATTTACAAAATTGGTCTGATGGGTGTGTCAGGAGAGTAAATCTGGATTGTGATAACAGAGATGGGTTTCTCAAGTTTACAGGAATGAAGTTGCCCAACACATCTTACTCCTGGTTTGATATGAACATGAACCTTCAGCAGTGTGAGAACTTGTGCTTGAAAAACTGCTCTTGCACTGCATATGCAAATTTAGATATCAGAGATGGTGGAAGAGGTTGCTTGCTTTGGTTTAATAACATTGTGGACATGAGAAAGCTACCTTATGCAGGACAAGACCTCTATGTAAGAGTAGCAGCTTCCGAACTAGAGAAGAACAAAACAAAAATTTGGAGTCACCCTGATATGAAAGAAAAAGAAGACATTGACATACCAATATTTGATTTTTCAACCATAGCCGATGCTACTGATAACTTCTCTGTCGGTAACAAATTGGGAGAAGGTGGATTTGGTCCAGTTTACAAGGGTACACTTACAAATGGGCCAGATATAGCTGTAAAGAGGCTTTGCAACAATTCAGGTCAAGGACCAGAAGAGTTCATAAATGAAGTTGAGCTAATTGCAAAACTTCAGCACAGAAATCTTGTGAAAATTCTTGGGTGTTGCATTCAGGATAATGAGCGACTTTTGATTTATGAATTCATGCCCAATAGAAGCTTGGACTACTTCATATTTGATCAAACTAAAAGCAGATCACTGTATTGGGTTCAACGCTTCCAAATTATTGGTGGGATTGCTCGAGGACTTCTCTATCTTCATGAAGATTCTAGACTAAGGATAGTTCATAGAGATCTCAAGACCAGTAATATTCTTCTTGACAAAAATATGAATCCAAAGATATCAGACTTTGGTCTTGCTAGGACATTTGGAGGAGATGAAGCACAAGGCAAAACAAAGAGAGTAGTGGGAACTTATGGTTATATTTCTCCTGAGTTTGCAGTCCGTGGATATTTCTCGGTGAAATCTGATGTATTTAGCTTTGGTGTTATTCTACTAGAGATAATTAGTGGAAAGAAAAACAGGGAATTTTTTGACAATTATGATCTTGACCTTCTCAGCCATACATGGAGACTGTGGTGTGAAGAGAAGCCATCGGAGCTGGTAGATGAATCACTAAACGATTCAATGGCTATACATGAAGTGATAAGATGTATTCACATTGGGCTCTTATGTGTACAAGAGAGACCAGAGGATAGACCAGACATGTCGGTTGTGGTTTTAATGCTGAATGGTGAGAAACCATTGCCATGGCCAAAGGAGCCTGGTTTTTATCCACACCAATTTGGTTCTTCAGGGGAACGTGCATTGCGCTCAACCAATGAAATTTCTACCATACTGGTAGATGGAAGATAG 2259 0.3984 MPRFDTQDTISTGKSIKSNETLISPAGTFEAGFFSFGNSNNQYLGIWYKNITPRTVVWVANRDIPLGNSSGVLQVTDAGKLVILDGTGATIWSSNVSETARNPVVQLLNSGNLVVKEANSTGNFLWQSFDYPGDTLLAGMRLQSNKVSGQQTSLTSWRNTEDPAMGEFELHVDTHGLPQLVITKGGTSLFRAGSWNGYLLSGIASETLTRYFNFSFVFTGQEVSFGYELLRSSTVLTYTLTPTGILQSFVWSDQAQSWQLLLTGPVDQCDNYAICGANANCDVKNSPICECLEGFIPKSQEIWNLQNWSDGCVRRVNLDCDNRDGFLKFTGMKLPNTSYSWFDMNMNLQQCENLCLKNCSCTAYANLDIRDGGRGCLLWFNNIVDMRKLPYAGQDLYVRVAASELEKNKTKIWSHPDMKEKEDIDIPIFDFSTIADATDNFSVGNKLGEGGFGPVYKGTLTNGPDIAVKRLCNNSGQGPEEFINEVELIAKLQHRNLVKILGCCIQDNERLLIYEFMPNRSLDYFIFDQTKSRSLYWVQRFQIIGGIARGLLYLHEDSRLRIVHRDLKTSNILLDKNMNPKISDFGLARTFGGDEAQGKTKRVVGTYGYISPEFAVRGYFSVKSDVFSFGVILLEIISGKKNREFFDNYDLDLLSHTWRLWCEEKPSELVDESLNDSMAIHEVIRCIHIGLLCVQERPEDRPDMSVVVLMLNGEKPLPWPKEPGFYPHQFGSSGERALRSTNEISTILVDGR* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01734 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Rops3g01734 752 PIRSF SRK 407 751 IPR024171 GO:0004674
Rops3g01734 752 PIRSF SRK 2 422 IPR024171 GO:0004674
Rops3g01734 752 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 163 IPR036426 -
Rops3g01734 752 CDD STKc_IRAK 447 713 - -
Rops3g01734 752 Pfam PAN-like domain 320 386 IPR003609 -
Rops3g01734 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 718 - -
Rops3g01734 752 CDD B_lectin 15 132 IPR001480 -
Rops3g01734 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 319 400 - -
Rops3g01734 752 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 698 - -
Rops3g01734 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 4 129 - -
Rops3g01734 752 CDD PAN_AP_plant 316 401 - -
Rops3g01734 752 SMART serkin_6 441 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01734 752 Gene3D - 4 129 IPR036426 -
Rops3g01734 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 405 516 - -
Rops3g01734 752 SUPERFAMILY Protein kinase-like (PK-like) 424 724 IPR011009 -
Rops3g01734 752 SMART ntp_6 321 400 IPR003609 -
Rops3g01734 752 ProSiteProfiles Protein kinase domain profile. 441 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01734 752 Gene3D Phosphorylase Kinase; domain 1 415 516 - -
Rops3g01734 752 Gene3D Hepatocyte Growth Factor 317 398 - -
Rops3g01734 752 Pfam S-locus glycoprotein domain 190 299 IPR000858 GO:0048544
Rops3g01734 752 Pfam Protein tyrosine and serine/threonine kinase 443 708 IPR001245 GO:0004672|GO:0006468
Rops3g01734 752 Pfam D-mannose binding lectin 55 158 IPR001480 -
Rops3g01734 752 Gene3D Transferase(Phosphotransferase) domain 1 517 716 - -
Rops3g01734 752 SMART blect_4 13 132 IPR001480 -
Rops3g01734 752 ProSiteProfiles PAN/Apple domain profile. 320 401 IPR003609 -
Rops3g01734 752 ProSiteProfiles Bulb-type lectin domain profile. 7 128 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01734 Rops-Chr3 29301105 29304874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01734 409 728 Receptor kinase-like Gene Family AT4G23190 55.385 2.32e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01734 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01734 - - cit:102616008 853.588