Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01721 ATGACAAAAGTTATGGGCATGATTTGTGCTATTACTGAACTTGAAAGTGATAGGAAACTACTTCTTACAAAATCTGGCCACAAATCTAAAGAGCCTACCTTGAGGCTTATGCAACTCCTACCCAAAACTGTTGAATGGTTGATGAGTGAATTAGGTAATCGTTCATATGCAGCAGGAGGGAATACAAGACTCTTATTCAAACCCTTCATAAACATATATTTCGGTGCTGCTTATATCGAATGGTTGTCAAACTTTGATAACAAGAAAAAAAGTGAAGAGTTTATTGTAAGGGCATATACAGGTGGTACAAAGAAGGCAACTCACAAATCAACTTTGCCCTATTGGAAGGGTTATCTCTCAGTCAAAGAAACTTTGCTCTATGACAGAGATAGTTTATTCCGCTTGATACATGGGCTAACATCCGGTGAAATTCTAGAACCAAGGAGAAGAATATGGATGGCTTTAGACGTGGCCAAAGGGATCGATTATCTCCACTGTGAAGCCTCCAATCAGGCATTGGGATCTCAAATCCCCAAACCTGACAGTTCCAAGGTTATTGTGTTGGATGTTGATGCTACTTGTTCTAAAGGCATTGCAAGATCCTTGAAGAAAATTGGGGTCAAGGAGATTTGGGATGTAGATAACAAAGAATAG 654 0.393 MTKVMGMICAITELESDRKLLLTKSGHKSKEPTLRLMQLLPKTVEWLMSELGNRSYAAGGNTRLLFKPFINIYFGAAYIEWLSNFDNKKKSEEFIVRAYTGGTKKATHKSTLPYWKGYLSVKETLLYDRDSLFRLIHGLTSGEILEPRRRIWMALDVAKGIDYLHCEASNQALGSQIPKPDSSKVIVLDVDATCSKGIARSLKKIGVKEIWDVDNKE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01721 217 PANTHER TRANSGLYCOSYLASE 7 130 - -
Rops3g01721 217 Pfam Transglycosylase SLT domain 8 109 IPR008258 -
Rops3g01721 217 Gene3D - 6 130 - -
Rops3g01721 217 SUPERFAMILY Lysozyme-like 33 125 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01721 Rops-Chr3 28984914 28994251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01721 129 166 MAP Kinase Kinase Kinase AT4G24480 71.053 2.22e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01721 - - cam:101505273 191.815