Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01709 ATGTCTTATGAAAATATTTGCTGCTATAGTGGAAGCCATTCTTCAGAGGTGCCATTGGTCGAGAACATCCTCAAACCTCTCGAAGGAATCAAAGAGGTTGTAGTCATCATGCCATCAAGAACGGTCATCGTTGTTCATGGCAGTTTTGTCATTTCCCAACGTCAAATTGTTAAGGCTCTCAATCAAGCAGGATTAGAAGCGAATATTAGAGTGTATGGGAGCGAAAAGCACAGAAAGAGATTGCCAGGTTCTTACTCAGTTGCTTCTGGTTTGCTACTTTTGCTTTCGTTTTCTCAGGTTTGTGTATTCTCCCTTGCACTGGCTGAACATTGTGGTGGCACCATGGAGCTCATGTGCATGCAGGCATATGCTCCCGCAACACCGGCAGCACCAAAGGACCTCTTAACCCTAACCTCGTCAACCCCACAAGAGGGAGCGAGTGAATTCCAGATCGCAAAGAAGAAGGAGCCTGAAACGAAACATCACAGAAGAAGGATGATGTGGAAAAGGGTAGTGGGAGAGGTGACTCTTAAGAGTGTTACCACAACATATGGCCGTGGAAACAATGTTCGTGGTCTTGAGGAGGATTCCACTCTTAAAATCGCTACTAGGCCGCAAGCAAGGCGTGTTGAGAGCTTGAGACAAACCATTCAGAGAAATGCATTTGCACTCCCTGTGGAAGAGATGATTCGCCGTCTTGGAAGCAGAATTGATCTTTCTAGGGATATAGTTCAGCCATATCGTTGCATGCCGTGCTGGCCCTGCAGGAAGCTGCTGAAGCTTACCTTGTTGCACTCGGTTTCAAACTACAAACCTTTCCAACTCCTTGTCCATACCGAGCCACACCCCCTCCTTCACGAGCAGGAGTTAGATTTTTCCAGAATATAG 888 0.4662 MSYENICCYSGSHSSEVPLVENILKPLEGIKEVVVIMPSRTVIVVHGSFVISQRQIVKALNQAGLEANIRVYGSEKHRKRLPGSYSVASGLLLLLSFSQVCVFSLALAEHCGGTMELMCMQAYAPATPAAPKDLLTLTSSTPQEGASEFQIAKKKEPETKHHRRRMMWKRVVGEVTLKSVTTTYGRGNNVRGLEEDSTLKIATRPQARRVESLRQTIQRNAFALPVEEMIRRLGSRIDLSRDIVQPYRCMPCWPCRKLLKLTLLHSVSNYKPFQLLVHTEPHPLLHEQELDFSRI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01709 295 Gene3D - 7 71 - -
Rops3g01709 295 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Rops3g01709 295 SUPERFAMILY HMA, heavy metal-associated domain 14 68 IPR036163 GO:0046872
Rops3g01709 295 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 5 103 - -
Rops3g01709 295 FunFam Putative cadmium/zinc-transporting ATPase 3 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01709 Rops-Chr3 28428596 28429632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01709 5 97 Primary Pumps ATPases AT4G30110 58.065 1.03e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01709 K01534 - gmx:100817567 132.494