Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01704 ATGAAGATGATCTTGATCTCCCATTGCTTGACCAATGTAAATAGTCATCGCATCGATAACTTCTCCTTAAAGAACAAGATTGGAGAAGGAGGTTTTGGACCTGTATACAAGGGAAGATTAGTAAGTGGACAAGAAATTGCTGTGAAGAAGCTTTCAAGAAGCTCTGGACAAGGAATGACTGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTTGGTTGTTGCATTCAGGAGCAAGATAGAATGCTGGTTTATGAATACATGCCTTACCATAGTTTGGATTGGTTGATTTTTGATGATGCTAAAAGCAAATTGCTAGATTGGCCTAAGCGCTTCAACATTATCTGTGGAATTGCTAAAGGTCTTCTCTATCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAACCAAGTAATATTTTGCTTGATGACAAGCTGAACCCGAAAATATCAGATTTTGGTATTGCTAGAATTTTTGGATTAGATCAGACTGAAGGAAATACAAAGCGAGTAGTTGGAACTTATGGCTACATGGCACCAGAATATGCTGTTGATGGACTTTTCTCTATGAAATCTGACGTTTTCAGTTTTGGAATTTTGTTGCTGGAGATCATAACTGGAAAGAAAAATAGAGGTTTTTATCTTGAAAATGACTCTCCAAACCTTGTCACTCATGCATGGAGTTTGTGGAAAGAGGGCAGGGCTTTAGAACTGATTTACCAAAACATAGAGGACTCTTGTGTTCTATCAGAGGTATTGCGTTGCATCCAAGTTGGTCTCTTGTGCGTGCAGCAACACCCAGAGGATAGGCCTGTAATGCCTTCAGTGGTTCTAATGTTGGTTAGTGAGAGTGAATTGGCTGAGCCAAAAGAGCCTGGTTACTATTTAAAGAAGGATCCATGTGCTGAAACTTCCAACAGTGATAAGATCTCAACTAATGAAATAACTATCACCTTATTTGAAGCACGATGA 1008 0.3859 MKMILISHCLTNVNSHRIDNFSLKNKIGEGGFGPVYKGRLVSGQEIAVKKLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCIQEQDRMLVYEYMPYHSLDWLIFDDAKSKLLDWPKRFNIICGIAKGLLYLHQDSRLRIIHRDLKPSNILLDDKLNPKISDFGIARIFGLDQTEGNTKRVVGTYGYMAPEYAVDGLFSMKSDVFSFGILLLEIITGKKNRGFYLENDSPNLVTHAWSLWKEGRALELIYQNIEDSCVLSEVLRCIQVGLLCVQQHPEDRPVMPSVVLMLVSESELAEPKEPGYYLKKDPCAETSNSDKISTNEITITLFEAR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01704 335 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 6 96 - -
Rops3g01704 335 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 97 300 - -
Rops3g01704 335 Gene3D Phosphorylase Kinase; domain 1 13 96 - -
Rops3g01704 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Rops3g01704 335 Gene3D Transferase(Phosphotransferase) domain 1 97 304 - -
Rops3g01704 335 SMART serkin_6 21 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01704 335 ProSiteProfiles Protein kinase domain profile. 21 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01704 335 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 331 - -
Rops3g01704 335 SUPERFAMILY Protein kinase-like (PK-like) 13 292 IPR011009 -
Rops3g01704 335 Pfam Protein tyrosine and serine/threonine kinase 22 289 IPR001245 GO:0004672|GO:0006468
Rops3g01704 335 Pfam Domain of unknown function (DUF3403) 295 335 IPR021820 GO:0004674
Rops3g01704 335 CDD STKc_IRAK 27 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01704 Rops-Chr3 28296381 28298259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01704 19 335 Receptor kinase-like Gene Family AT4G11530 56.575 1.74e-129 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01704 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01704 - - gmx:100775648 538.88