Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01702 ATGATGAGTGCAAAGAGTGAATCGGAGGAAGATAGAATGCTGATTTATGAATACATGCCTAACCGTAGTTTGAATTGGTTGATTTTTGATGATGCTAAAAGCAAATTGCTAGATTGGCCTAAGCGCTTCGACATTATCTGTGGAATTGCTAGAGGTCTTCTCTATCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAACCAAGTAATATTTTGCTTGATGAAAAGCTGAACCCGAAAATATCAGATTTTGGTATTGCTAGAATTTTTGGATTAGATCAGACTGAAGGAAATACAAAGCGAGTAGTTGGAACTTATGGCTACATGGCACCAGAATATGCTGTTGATGGGCTTTTCTCTATGAAATCTGACGTTTTCAGTTTTGGAATTTTGTTGCTGGAGATCATAACTGGAAAGAAAAATAGAGGTTTTTATCTTGAAAATGACTCTCCAAACCTTGTCACTCATGCATGGAGTTTGTGGAAAGAGAGCAGGGCTTTAGAACTGATTTACCAAAACATAGAGGACTCTTGTGTTCTATCAGAGGTATTGCGTTGCATCCAAGTTGGTCTCTTGTGCGTGCAGCAACACCCAGAGGATAGGCCTGTAATGCCTTCAGTGGTTCTAATGTTGGTTAGTGAGAGTGAATTGGCTGAGCCAAAAGAGCCTGGTTACTATTTAAAGAAGGATCCATGTGCTGAAACTTCCAACAGTGATAAGATCTCAACTAATGAAATAACTATCACCTTATTTGAAGCACGATGA 774 0.3863 MMSAKSESEEDRMLIYEYMPNRSLNWLIFDDAKSKLLDWPKRFDIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDEKLNPKISDFGIARIFGLDQTEGNTKRVVGTYGYMAPEYAVDGLFSMKSDVFSFGILLLEIITGKKNRGFYLENDSPNLVTHAWSLWKESRALELIYQNIEDSCVLSEVLRCIQVGLLCVQQHPEDRPVMPSVVLMLVSESELAEPKEPGYYLKKDPCAETSNSDKISTNEITITLFEAR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01702 257 SUPERFAMILY Protein kinase-like (PK-like) 9 214 IPR011009 -
Rops3g01702 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Rops3g01702 257 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 253 - -
Rops3g01702 257 Gene3D Transferase(Phosphotransferase) domain 1 19 227 - -
Rops3g01702 257 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 222 - -
Rops3g01702 257 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01702 257 SMART serkin_6 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01702 257 Pfam Domain of unknown function (DUF3403) 217 257 IPR021820 GO:0004674
Rops3g01702 257 Pfam Protein kinase domain 7 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01702 Rops-Chr3 28223810 28231643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01702 10 253 Receptor kinase-like Gene Family AT4G23150 56.098 7.09e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01702 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01702 - - gmx:100775648 407.527