Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01670 ATGGGTGAAAACTGGTGCAGGAGGAGGCAATCACGTCTGAAGTTGTACCATACGAATTATCAGAAAGAGACTTGGAATAAGGTGCTGCAGTGCCTCAACCCGGTGGGTCTGCAGGGGAGCGGGAACAAGGTGTCCAAACAGGCTCTCAAAGAGAGGTTTAAGAGCTTCAATGCCATGTTTGAAGAGATACACAAGACGCAGAGAAGTTGGATGGTGAGCGACGAGCAGCTTCAATCGGAGCTCAGGGTTTCAATATCGGCTTTGGTGATCCCAGCCTACCGCTCCTTTCTTGGAAGATTCAAACACCATCTCCATGGCCAGGAGGAGGACGTAGAAGGAAAGGACCCTGGGAAGAATGTTATGAGAGAAATGCATAGGTTGAGAGGAAGCCTTCCTGCACCAGCTCACATCACTAGCTGCTCTCCCCACATTCGTGCACAGGTAATGGGTTGGTTCCCTTTTTCTTCTTTTTTGTTTCTTACGGCCAAGACAAGTGAGGAGGTTTTTCGGATCTTTCAAGTATTCAACACCTGGAATGAAGAAACCGTGGTGCTTGTTCGTGTGAGCTATGCAGTCCCTTATTGTGTCATGCCCATAAAGCAGCATGATGAGTCTACCTCCTCCTAA 627 0.4848 MGENWCRRRQSRLKLYHTNYQKETWNKVLQCLNPVGLQGSGNKVSKQALKERFKSFNAMFEEIHKTQRSWMVSDEQLQSELRVSISALVIPAYRSFLGRFKHHLHGQEEDVEGKDPGKNVMREMHRLRGSLPAPAHITSCSPHIRAQVMGWFPFSSFLFLTAKTSEEVFRIFQVFNTWNEETVVLVRVSYAVPYCVMPIKQHDESTSS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01670 208 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 107 IPR004140 GO:0000145|GO:0006887
Rops3g01670 208 Pfam Exo70 exocyst complex subunit 1 108 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops3g01670 208 Gene3D Exocyst complex component Exo70 1 127 - -
Rops3g01670 208 SUPERFAMILY Cullin repeat-like 1 110 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01670 Rops-Chr3 26670219 26670908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01670 1 110 EXO70 exocyst subunit family AT5G13150 67.568 9.14e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01670 K07195 - mtr:25485763 181.8