Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01663 ATGAAAGAGGAGTCAATTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGAATTGTTTTGGCAATTTTTGCATTCTTCTGCCATATGTGCCATAAAAAACGTTCACAAATAGGCAATAGCAGTTCCAGGAGGGCTGCTACCATACCCATCCGTACAAATGGTGCTGATTCTTGTACTATTCTATCAGACTCAACCATAGGTCCAGAATCACCTGTAAAGTCTGGAAGGAATGGCTTGTCCTTCTGGCCTGATGGGTTTAAGAAGAGTAACATGATCTCAGCATCTGGACTACTTGAATATCCATACAAGGATTTGCAGAAGGCAACATATAATTTTACAACAATCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGAGAGAGAGAATTTCACACAGAGGTTATGTTGTTGGGAAGGTTACACCATAGGAATCTGGTGAATTTGATTGGATATTGTGCAGAGAAGGGGCAACACATGCTTATATATGTCTACATGAGCGAGGGTAGTTTGGCTTCCCACTTGTATAGTGATGTGAATGAACCACTGAGGTGGGATTTGAGAGTTCACATATCTTTAGATATAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAATTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGACCAATCCATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAAATGGTTGATAAACATGCAGCTATTCGAGCTGGCAGAAACCCTCAACAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAATACTGAGGGAAAACTTGGTTGGGAGGAAATTGTGGATTCTCACCTTGAAGGTAACTTTGATGTCCAAGAACTCAATGAAGTAGCAACCCTTGCCTACAAATGCATCAACCGCACCCCAAGTAAGCGCCCTTCTATGAGGGACATAGTTCAAGTGTTCACGAGGATCCTTAAATCAGGGAATCATAGGAATCATCACAAGAACACATTGTCAGCCACAGCAGAAGAAGTTTACATTGATCTTGATCAGCTAGAAACCAAGATTTCTGTTACCAACCACAGGAGAGAAGAATCTATGGATAGTATAACAGCAGACACATTTCAAGTAAATGATACTCCAAATTTTGGATTCACTAATGAAAATGAAGTGATAGAAGAGAAAGGTACCTCTCGCTCACATCAGCAGCTGGCTACATTTACTTTTCATGCATGTTCCTAA 1302 0.4101 MKEESIGLIIGVSIGVVIGIVLAIFAFFCHMCHKKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTIGPESPVKSGRNGLSFWPDGFKKSNMISASGLLEYPYKDLQKATYNFTTIIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEREFHTEVMLLGRLHHRNLVNLIGYCAEKGQHMLIYVYMSEGSLASHLYSDVNEPLRWDLRVHISLDIARGLEYLHDGAIPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRAGRNPQQGLMEYVELAAMNTEGKLGWEEIVDSHLEGNFDVQELNEVATLAYKCINRTPSKRPSMRDIVQVFTRILKSGNHRNHHKNTLSATAEEVYIDLDQLETKISVTNHRREESMDSITADTFQVNDTPNFGFTNENEVIEEKGTSRSHQQLATFTFHACS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01663 433 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01663 433 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Rops3g01663 433 Gene3D Transferase(Phosphotransferase) domain 1 188 270 - -
Rops3g01663 433 Pfam Protein tyrosine and serine/threonine kinase 114 267 IPR001245 GO:0004672|GO:0006468
Rops3g01663 433 SUPERFAMILY Protein kinase-like (PK-like) 94 339 IPR011009 -
Rops3g01663 433 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Rops3g01663 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Rops3g01663 433 PANTHER OS01G0750732 PROTEIN 280 353 - -
Rops3g01663 433 SMART serkin_6 112 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01663 433 Gene3D Transferase(Phosphotransferase) domain 1 271 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01663 Rops-Chr3 26033582 26039159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01663 27 338 Glycoside Hydrolase AT3G07070 33.241 1.75e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Rops3g01663 PK_Tyr_Ser-Thr 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01663 - - gmx:100785634 639.802