Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01658 ATGAGATCGAAAACCTGTGTCGCTCACGCGCCCATGAGGCCTTTCACTTGGACCCCACCAAGTGGGGTGTTATTGTTCAACCTTATTCCGGTTCTCCGGCCAACTTCGCCGCCTAAACGGCAGTGCTTCAGTCACATGACCGCATCATGGGTCTGGATCTGCCTTCCGGTGGCCACCTCACATGGGTACTACACCTATGCACACAGCTTTATAGAAAAGAAGGAAACACAAGATGACTTTGTTAGTGAACTATTTGATTCAGCATCTGGGTTGTTAGATGAGCACACGGCAAAGATACTATGGACTACTTGCTGGGAAGATTTAATTCATTTAAAGAAAGAGGTTGAAGATCATGATTCATGCCTCCCACAGGAATTGTTTGGTAGCACCAATAAAATCAGTTCAGAGATTCGACCATTTGCACAAGCAGACATCCGAAATTTGATTAATGCTTGCCATCCTCAGTTCAAGGAAAAGTTTCTTCACTGTTTGACAAAAAATAATCATCCCTTACGTTTCTCAGGAGAAGGAGATGATTCCAAGATATGGCTTGTCACTTATATGGGATCACATTTTTCCAAATCCAGTGTTCCTAAAAGAAATTTGCGTCGTGTTTTGCTCCAGCAAATATCAGAACCACCTAGTCCAGGCCCTGCAGTTGGATCACCTACACCCAGTCTAGCACCATCACCTGAACCCAGTCTATCCCCATCACCTGAACCCAGTCTATCCCCATCACCTGCTCCAGCGCCTCTAGTTCCTAAACCTCTAGATCCTCCTTCGCCACCATCCTCATTTTTCCCAAAACTGACACCACCAGCAGCTGCAGATGTTTCTGCTCCTGCATCTAATGACACTAACAAACAGGCAGATAATGATAGTAATAGAAAAACAGTTGTTCTTGCAGTGGTTATAACTGCATCGGTGACATTTATAGCTGCAGCACTGTTCTTTTTATGCTGTACTCGGTTTTGTAAGACTGGCCGAGTTAGACTTAATGATGAGAGGCCCCTTCTCAGCTTGAGCATGAGTGACTATTCTGTTGGTCCTTCCAGTCATGGTTTTGGAAATTCAATAAAAGGGGAGAAACTTGGGTTTCAGTCATCAAGTAATAGTTTAGTAGACAACAAGAAGACCTCAGTGCAAGAAAGTCAATCAATAGGAACTTTTGCTGCTTCTGGATCACCATTTGAATTGAAACCTCCTCCCGGGAGAGTGGGAACTATCCCTTCTGGAATGCCTCCTTTAAAACCTCCTCCAGGCAGGATGAATCCTCTTCCCCCTGAGCCACCTTCATTTAGGCCTTCTGATAATGCTGCTGTTGCTGCTCCTCCTCAACAGCCTGGTGGTGGCAGAGTTCCACCTCCTGGTCCTCCACCACCACCCTCTGCAGCAGCTGGTACCAAACCTGGTCCTCCTCCTCCACCACCACCCCTAGCACTGGCTGGTGCCAAACCTGGTCCTCCTCCTCCACCACCCCCAGCACTGGCTGGTGCCAAACCTGGTCCTCCTCCACCGCCACCCCCAGCACTGGCTGGTGCCAAACCTGGTCCACCTCTACCACCTGCAGCACCTGCTGGTGCCAAACCTGGCCCTCCTCCACCACCACCCCCAGCTCCAGCTGGTGCGAAACCTGGTCCTCGTCCACCACCTCCTCCTAAGAGTGGTATAACTCCTCCTCGACCTCCTCCTCCAATGGGCTCAAAGGCGGCTTTAGCTAGTGGACCAAAAGCTACAGAGAATGTTGAAGCTCGTGCAGAAGGTGAAGCTGATGCTCCTAAAGCCAAGCTAAAGCCATTTTTCTGGGATAAGGTTCAAGCTAACTCAGATCAATCAATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACGCTTTTTGGCTATAATGCTGTGGATAAAAACAATGGTCAACGACAGAAAGAATCTTCCTCCCAACACCCTTCACCTCAGTATATTCAGATTATTGACAAAAGGAAAGCGCAAAATTTGTTAATTCTGTTGCGAGCATTGAGTGTTACAATGGAAGAAGTTTGCGATGCACTCTATGAAGGACATGAGCTGCCCTCAGAATTCCTTCAAACGTTGCTGAAGATGGCACCAACATCAGACGAAGAACTCAAACTTAGACTTTTTAGTGGTGATCTGTCTCAACTTGGGCCTGCTGATCGTTTCCTGAAAGCCCTGGTTGACATTCCGTTTGCTTTTAAGCGAATGGAAGCACTGCTTTTCATGGGTACATTTAAAGAGGATCTCACTATTACTATGGAGTCTTTTGCATTTTTAGAGGTTGCTTGCAAGGAGCTAAGAAGCAACCGTCTATTCCTCAAGCTTCTTGAAGCTGTTCTGAAAACCGGCAACCGTATGAATGATGGAACATTCCGTGGCGGTGCTCAAGCATTTAAACTTGACACACTTCTGAAATTATCTGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTTGTTGTTCTAGAGATTATCCGGTCTGAGGGCAAAAAAGCTGCTCGAGCAGCGAAAGAGAGCCAGAGTTCACCTAGTACTAAAACAGATGACCTTGAAGATAACACACATGAATCAGAAGATCACTACCGCGAAATTGGTCTTCAGGTGGTTTCGCACTTGAGCAGTGAACTTGAGAATGTGAAAAAAGCAGCAATTCTAGATGCTGACAGCTTAACAGCAACTACTTCCAAACTTGGTCATGGTATCATAAAAATCAAAGACTTGGTAAACAAAAACTTGAAGAATGTGGAGGAAGATAGAGGGTTTCGCGAGACAGTGGAAAGTTTTATGAAGAATGCTGAGGTTGATGTTATGAAACTGCTGGAAGAAGAGAAGAAAATCATGGCTTTGGTGAAGAGTACTGGTGATTACTTTCATGGGAAAGCTGGGAAGGATGAAGGTTTAAGATTGTTTGTAGTAGTAAGAGATCTCTTAATAATGCTAGATAAAGTATGCAAGGAGGTGAGAGTTACGCAGAAGAAGCCAGCAAAAACTATAAAACTAGAGACTTCTCGAGGATCATCTTCGTCTGACACGCGTCCACCACTTTCTGATTTTCGTCAGCGGCTTTTTCCAGCAATTGCTGAAAGGAGGATTGATGACCTTAGTTCAGATGATGAGAGTCCATAG 3162 0.4551 MRSKTCVAHAPMRPFTWTPPSGVLLFNLIPVLRPTSPPKRQCFSHMTASWVWICLPVATSHGYYTYAHSFIEKKETQDDFVSELFDSASGLLDEHTAKILWTTCWEDLIHLKKEVEDHDSCLPQELFGSTNKISSEIRPFAQADIRNLINACHPQFKEKFLHCLTKNNHPLRFSGEGDDSKIWLVTYMGSHFSKSSVPKRNLRRVLLQQISEPPSPGPAVGSPTPSLAPSPEPSLSPSPEPSLSPSPAPAPLVPKPLDPPSPPSSFFPKLTPPAAADVSAPASNDTNKQADNDSNRKTVVLAVVITASVTFIAAALFFLCCTRFCKTGRVRLNDERPLLSLSMSDYSVGPSSHGFGNSIKGEKLGFQSSSNSLVDNKKTSVQESQSIGTFAASGSPFELKPPPGRVGTIPSGMPPLKPPPGRMNPLPPEPPSFRPSDNAAVAAPPQQPGGGRVPPPGPPPPPSAAAGTKPGPPPPPPPLALAGAKPGPPPPPPPALAGAKPGPPPPPPPALAGAKPGPPLPPAAPAGAKPGPPPPPPPAPAGAKPGPRPPPPPKSGITPPRPPPPMGSKAALASGPKATENVEARAEGEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRQKESSSQHPSPQYIQIIDKRKAQNLLILLRALSVTMEEVCDALYEGHELPSEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKALVDIPFAFKRMEALLFMGTFKEDLTITMESFAFLEVACKELRSNRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGKKAARAAKESQSSPSTKTDDLEDNTHESEDHYREIGLQVVSHLSSELENVKKAAILDADSLTATTSKLGHGIIKIKDLVNKNLKNVEEDRGFRETVESFMKNAEVDVMKLLEEEKKIMALVKSTGDYFHGKAGKDEGLRLFVVVRDLLIMLDKVCKEVRVTQKKPAKTIKLETSRGSSSSDTRPPLSDFRQRLFPAIAERRIDDLSSDDESP* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01658 1053 ProSiteProfiles Formin homology-2 (FH2) domain profile. 587 1018 IPR015425 -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 1012 1027 - -
Rops3g01658 1053 PANTHER FORMIN-RELATED 286 1048 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops3g01658 1053 MobiDBLite consensus disorder prediction 211 292 - -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 388 592 - -
Rops3g01658 1053 SMART it6_source 587 1007 IPR015425 -
Rops3g01658 1053 Pfam Formin Homology 2 Domain 589 992 IPR015425 -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 216 269 - -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 1010 1030 - -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 845 869 - -
Rops3g01658 1053 SUPERFAMILY Formin homology 2 domain (FH2 domain) 533 1008 - -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 407 434 - -
Rops3g01658 1053 MobiDBLite consensus disorder prediction 448 569 - -
Rops3g01658 1053 Gene3D Formin, FH2 domain 592 1022 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01658 Rops-Chr3 25960734 25975751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01658 591 1044 FH2 protein (formin) Gene Family AT5G54650 67.686 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01658 - - gmx:100793413 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01658 3 25960734 25975751 Rops3g01658 3 25960734 25975751 ECH
Rops7g01166 7 15546182 15552296 Rops3g01658 3 25960734 25975751 PCT