Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01657 ATGGTGGGGACTCCAGTTAATGGAAGAGCAAGGCAAGCTTTTACAGTTGTAAATGGTGGCCAAGATCATGACCTGAATAGTGCTCCTCCAAGCAATGCTGGATCGGATAATGGTATAATAGAGTTCACAAGAGAGGATGTGGAAGCATTGCTAAATGAAAAAGCCAAAAGGAAAGACAGATTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGCGTCAGATGGTTCCAAGACCTTGAGATGTGCTACTCACTAGAGCAGGAAAAGTTGAAGAATTCACTGGAATTGACCCGGCAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAACTAAATTCAATTATTACGGAAATGAGAAGGAATTGCACTAATTTGCAAGAGAAATTGATAAAGGAAGAATCAGAAAAGTCGGCTGCAGTGGAATCTCTTGTTAAAGAGAGAGAGGCAAGGTTTAACATTGAGAGGTCACAGACTACTCTGTCAGAGGATCTTGGAAGAGCTCAACGAGAGATTCAAAGTGCAAATCAGAAGATATCGTCACTCAATGACATGTATAAGCGGTTACAGGATTACATATCAAGCTTACAACAGTACAATGGAAAACTTCATACAGAGCTTTCATCAGTTGAAGATGAACTTAAACGTGTCGAGAAAGAGAAGGCTGCTGTGGTGGAGAATATCACCATGCTAAGGGGTGAACTTACTTTATCCATCTCTTCTCAAGAAGAGGCCATAAAACAGAAGGATGCTCTGGCTAGTGAAGTTGCCTCTCTGAGAGGAGAGTTGCAACAAGTAAGAGATGATCGAGACCGCCATTTATCTCAAGTGCAAACTTTAAATGCTGATCTAGATAAATTTAGAGAATCTACGCAAAACTCCTGCACTGAATTGGACAACTTGACATTAAAAGCAAATGAACTGGAGGCAAAATGTTCTTTGAAAGATAATCAAATAAAGGCATTGCAAGAACAGCTAGCAACTGCAGAGAAGCAACTGCAGGCATCTGATATATCTGCATTTGAGACAAGGACAGAATTTGAAGGGCAACAGAAATTTGTGAGTGAGTTACAAAGACGCGTAGCAGATGCAGAAAATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAGTTAAAAGGAAACATCCGTGTATTCTGTCGAGTGAGGCCTTTGTTGCCTGATGAAAGTTGTAGCACAGAAAGCAAGATTTTCAGTTATCCAACATCAATGGAAGCTTCTGGACGAGGCATTGATCTAGCCCAAAATGGCCAAAAACATTCTTTTACATTTGATAAAATTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTGTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCAGAGGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACGAAGCAATCTCAGCAGCCTCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGTGATCTGATATTTACAAACAGATCGGATGGAGCACGCATTGAAAATGGAACTCCTGGGAAACAATATACAATTAAACATGATGCAAATGGAAATACACAAGTTTCTGATCTTACAGTAGTAGATGTTCAGAGTGCTAAAGAGGTCGCATTTCTTTTAAATCAAGCTGCACATAGCAGATCTGTCGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGCGAGCGCCTTTCGAAGAGTGGATCAACCGGGGACCGGTTGAAAGAGACTCAAGCAATCAACAAAAGTTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTACTTCAACCTTGTCTTGGTGGGGACTCAAAGACTTTAATGTTTGTAAACATCTCACCTGATCCTTCTTCAGTAAGTGAGTCACTATGCTCACTCAGATTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGACGTTCGACAGACTCACGCTTAAGCTATTTCTGA 2277 0.3992 MVGTPVNGRARQAFTVVNGGQDHDLNSAPPSNAGSDNGIIEFTREDVEALLNEKAKRKDRFNYKERCENMVDYIKRLKVCVRWFQDLEMCYSLEQEKLKNSLELTRQKCIEIELLLKIKEEELNSIITEMRRNCTNLQEKLIKEESEKSAAVESLVKEREARFNIERSQTTLSEDLGRAQREIQSANQKISSLNDMYKRLQDYISSLQQYNGKLHTELSSVEDELKRVEKEKAAVVENITMLRGELTLSISSQEEAIKQKDALASEVASLRGELQQVRDDRDRHLSQVQTLNADLDKFRESTQNSCTELDNLTLKANELEAKCSLKDNQIKALQEQLATAEKQLQASDISAFETRTEFEGQQKFVSELQRRVADAENKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTESKIFSYPTSMEASGRGIDLAQNGQKHSFTFDKIFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLIFTNRSDGARIENGTPGKQYTIKHDANGNTQVSDLTVVDVQSAKEVAFLLNQAAHSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVSESLCSLRFASRVNACEIGTPRRQTNGRSTDSRLSYF* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01657 758 FunFam Kinesin-like protein 345 739 - -
Rops3g01657 758 Coils Coil 169 203 - -
Rops3g01657 758 SMART kinesin_4 397 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 735 IPR027417 -
Rops3g01657 758 Coils Coil 120 147 - -
Rops3g01657 758 CDD KISc_C_terminal 397 739 - -
Rops3g01657 758 Coils Coil 309 350 - -
Rops3g01657 758 Coils Coil 40 60 - -
Rops3g01657 758 Coils Coil 253 294 - -
Rops3g01657 758 Gene3D Kinesin motor domain 399 755 IPR036961 -
Rops3g01657 758 Gene3D - 254 398 - -
Rops3g01657 758 PANTHER KINESIN-LIKE PROTEIN KLP-3 45 745 IPR027640 GO:0003777|GO:0007018
Rops3g01657 758 Coils Coil 211 245 - -
Rops3g01657 758 Pfam Kinesin motor domain 405 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 Coils Coil 365 385 - -
Rops3g01657 758 ProSiteProfiles Kinesin motor domain profile. 399 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 ProSitePatterns Kinesin motor domain signature. 637 648 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops3g01657 758 SUPERFAMILY Tropomyosin 216 384 - -
Rops3g01657 758 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 PRINTS Kinesin heavy chain signature 638 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 PRINTS Kinesin heavy chain signature 607 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops3g01657 758 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01657 Rops-Chr3 25933859 25940227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01657 94 749 Calmodulin-binding Proteins AT5G65930 31.050 8.49e-81 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01657 K10405 - gmx:100784221 1310.43