Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01639 ATGGCTTTCAATTCCGAAGAGAAACAACTTTCACTTCTCAAAGCAGATGAAAACAATGCACTCCTTTCTGCCTTAGTGCTTTCCTGTAGCCCCATCACCACTGCAGTTCTAAATGCTGCACTTGAACTCAACATATTTGAGGTCATAGCTAAGGCAAGCCCACCTGGTGTCTCAGCTTCTGAGATAGCTTCTCAACTTCCAACTCAGCACCCAGAAATTCCACGCAAGCTGGATCGCATGCTATGTCTACTTGCAAGTCTCTCTCTTCTTACTTGTTCCTCACGCTCACATAAAGATTGTGGCATTGAAAGACTCTATCAATTATCATTGACTGGTAAATACTTTGTCAATGATGAGAATACAGGCTCATTGGCTTTATTGCCAATGTTTAAATCTCACCGAGCAATGGTAGATGTTTTCCTCAATTTTAAGGAGATGCTTTTGGATGGCAACACTGACATATTCAAGAACATTCATGGAATGTCTTTTCATCAATTAACAGAGAGAGATTCAGCGTTGAATCATGTTTTTAACAAAGCGATGGCCAATCTTTGCACGTTGGAGATGAGTGAGATACTTGAAAAGTATGATGGATTTGAAGGAATATCATTGCTGGTTGATGTTGGGGGTGGTATTGGACAAAATTTGAATATGATAATTTCTAGGTATCCTTCAATTAAGGGTGTTAATTTTGATCTACCCCAAGTGATACAAAATGCTCCTGCTTATCCAGGGATAGAACATGCTGCAGGAGATATGTTTGAAAGTGTTCCCAAAGGCGACGCCATTATATTAAAGGCTGTATGTCACAATTGGTCTGATGAAAATTGCCTAAAACTTTTGAGTAATTGCTACGAAGCTCTGCCACCCAATGGGAAAGTAATCGTTGTGGACTTCGTAATGCCCGAAACAATTCAGTCATCTGATGCAGATCAGTTTGTTTCTAGTATAGACAACTTGATGCTTATAGTGGATGGGAGAGAGAGAACCAAGAATGAATTCGAGAAATTGTGTAAAGGCTCTGGATTTCTAAATTTTCAATTTGTTGGTCGTGCTTTCTCAGTTCTCGGAGTGATGGAATTTTATAAATAA 1092 0.3938 MAFNSEEKQLSLLKADENNALLSALVLSCSPITTAVLNAALELNIFEVIAKASPPGVSASEIASQLPTQHPEIPRKLDRMLCLLASLSLLTCSSRSHKDCGIERLYQLSLTGKYFVNDENTGSLALLPMFKSHRAMVDVFLNFKEMLLDGNTDIFKNIHGMSFHQLTERDSALNHVFNKAMANLCTLEMSEILEKYDGFEGISLLVDVGGGIGQNLNMIISRYPSIKGVNFDLPQVIQNAPAYPGIEHAAGDMFESVPKGDAIILKAVCHNWSDENCLKLLSNCYEALPPNGKVIVVDFVMPETIQSSDADQFVSSIDNLMLIVDGRERTKNEFEKLCKGSGFLNFQFVGRAFSVLGVMEFYK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01639 363 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Rops3g01639 363 Gene3D Vaccinia Virus protein VP39 174 349 IPR029063 -
Rops3g01639 363 PANTHER O-METHYLTRANSFERASE 34 353 IPR016461 GO:0008168
Rops3g01639 363 Gene3D - 33 192 IPR036388 -
Rops3g01639 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 363 IPR016461 GO:0008168
Rops3g01639 363 Pfam Dimerisation domain 36 85 IPR012967 GO:0046983
Rops3g01639 363 PIRSF O-mtase 2 363 IPR016461 GO:0008168
Rops3g01639 363 Pfam O-methyltransferase domain 142 343 IPR001077 GO:0008171
Rops3g01639 363 CDD AdoMet_MTases 205 301 - -
Rops3g01639 363 SUPERFAMILY "Winged helix" DNA-binding domain 17 119 IPR036390 -
Rops3g01639 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01639 Rops-Chr3 25470874 25474215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01639 4 355 Monolignol Biosynthesis Gene Families AT5G54160 46.328 1.70e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01639 - - gmx:100784030 464.922